RNA id: TU322850


Basic Information

Item Value
RNA id TU322850
length 313
lncRNA type inter_gene
GC content 0.39
exon number 1
gene id G284872
representative True

Chromosome Information

Item Value
chromosome id CI01000072
NCBI id null
chromosome length 5473029
location 1923253 ~ 1923565 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence

AAAACAAAATAACGACTTTATGACAATATCTAGTGATGGGCGATTTCAAAACACTGCTTCATGAAGCTTTACGAATCTTTTGTTTCGAATCAGGGATTCGGAGCGCCAAAGTCACTTGATTTCAGTAAACGAGGCTTTGTTACGTGACAAGTGTTTCGAAATTTCAATGGTTCACCACTGGGGGGCATGACTTTGGCAGTTTGATTCACACTCTGAACCACTGAATCGAAACAAAAGATTCGTAAAGCTTCGAAGCTTCATGAAGCAGTGTTTTGAAATCGCCCAACACTAGATATTGTTAATAGAGTAAATA

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU322770 lncRNA upstream 767 1920983 ~ 1922486 (+) True G284796
TU322767 lncRNA upstream 3420 1916895 ~ 1919833 (+) True G284793
TU322849 lncRNA upstream 8951 1913995 ~ 1914302 (+) True G284871
TU322847 lncRNA upstream 11892 1911012 ~ 1911361 (+) True G284869
TU322845 lncRNA upstream 13890 1909136 ~ 1909363 (+) True G284867
TU322851 lncRNA downstream 547 1924112 ~ 1925189 (+) True G284873
TU322719 lncRNA downstream 13922 1937487 ~ 1939318 (+) True G284745
TU322858 lncRNA downstream 43482 1967047 ~ 1967313 (+) True G284876
TU322763 lncRNA downstream 99850 2023415 ~ 2068360 (+) True G284789
TU322759 lncRNA downstream 313552 2237117 ~ 2242589 (+) True G284785
CI01000072_01864149_01879788.mRNA mRNA upstream 43049 1863911 ~ 1880204 (+) True CI01000072_01864149_01879788
CI01000072_01762899_01783522.mRNA mRNA upstream 139293 1762567 ~ 1783960 (+) True CI01000072_01762899_01783522
CI01000072_01724644_01730223.mRNA mRNA upstream 192093 1724452 ~ 1731160 (+) True CI01000072_01724644_01730223
CI01000072_01413987_01424254.mRNA mRNA upstream 498999 1413987 ~ 1424254 (+) True CI01000072_01413987_01424254
CI01000072_01406735_01412673.mRNA mRNA upstream 510133 1406735 ~ 1413120 (+) True CI01000072_01406735_01412673
CI01000072_02000581_02009243.mRNA mRNA downstream 76075 1999640 ~ 2009426 (+) True CI01000072_02000581_02009243
CI01000072_02016536_02023336.mRNA mRNA downstream 92857 2016422 ~ 2023361 (+) True CI01000072_02016536_02023336
CI01000072_02028275_02032319.mRNA mRNA downstream 104311 2027876 ~ 2032703 (+) True CI01000072_02028275_02032319
CI01000072_02033013_02040077.mRNA mRNA downstream 109412 2032977 ~ 2040725 (+) True CI01000072_02033013_02040077
CI01000072_02058184_02067046.mRNA mRNA downstream 134322 2057887 ~ 2067049 (+) True CI01000072_02058184_02067046
TU321805 other upstream 1571965 349124 ~ 351288 (+) True CI01000072_00338411_00351144
TU322715 other downstream 57965 1981530 ~ 1985140 (+) True G284742
TU323494 other downstream 2046692 3970257 ~ 3976214 (+) True G285428
TU324691 other downstream 2245539 4169104 ~ 4172093 (+) False G286470
TU324692 other downstream 2245539 4169104 ~ 4175651 (+) True G286470
TU324705 other downstream 2301273 4232318 ~ 4232421 (+) False G286474

Expression Profile