RNA id: CI01000073_00805997_00811146.mRNA



Basic Information


Item Value
RNA id CI01000073_00805997_00811146.mRNA
length 1053
RNA type mRNA
GC content 0.52
exon number 8
gene id CI01000073_00805997_00811146
representative False

Chromosome Information


Item Value
chromosome id CI01000073
NCBI id null
chromosome length 1307889
location 805997 ~ 811165 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence


AGAAGAGGAAAAGAAGTTGTTCTCGCAGCGCAGAAGCTGAGAATGCTTGCGATCTGCTCTACAACTTCGATCAAAGTGCACCTCCAACATTCAGCACTAATGTGGCGGTGAAGCATCTTCAGCCCGTTGGTGTTGGTGAGGGAAACGAGAGGCCGGGGAGAAAGAGGAGGAGAGCCGGCTCAGGTCAGAAAGTAAAAGTGGAGGATCATCAGGGTACTGCGCAGAGAAGTACTGAAGATCAGGATTCTCTACAGCACACGAGCTGTTCTGCAGAGAAACATGGTGCTCAGGACCCTCGCAGCAGTGGCCCTGATGTCCTCTCAGCTGAAGATCAGCAGGTGGCACTGAAATTTGCCTTGAAGACGGATACCACGGAATTTATCAGCATTCCTGGTCATCCTACGCCCCTTCCCTTAGAAGTTGCCCTAACAATGCTTGCTAACAAGGGCCCCAGGGTTCCACAGATAGTTCAGCTGCTGGAGTGGCAGGACCAGCTCGGCTTCTACATCATGATCCTGGAACGTCCCTCACCCTGCGAGGATCTGTTTGATTTCCTGCAGCACCACGGAGGCGTCCTCATGCTCCACCGGGATATCAAACTAGAGAACCTGCTGTTCAACAAGGACATGCTTGAAGTCAAACTTATTGACTTCGGGTGCGGGGACCTTCTAAAAACTTCTGCCTATAAGACATTCTGGGGCACACAAGTGTACTGCCCTCCTGAGTTTGATCAGAGTGGCAAGTACCATGGGAAACCCACAACTGTATGGTCGCTGGGAGTGCTCGTGTTCGAGTTGTTGTGCGGAGATCCTCCAGACAGCAACGACCTGGACATGATTGACGCGGGCATCTGGTCTAAACCTGGATTGTCAAAAGAATGCTGCCATTTGATTCATTCTTGCCTGCAGCAGAAGCCAAAGAAGCGGCTTGGTTTGGGGAAAATCATTCTCCATGACTGGTTCAAGTCCCAGAGCTCTCCGTCTAGGCTGCCCTGGCCTCAGCACTCCTCATTCTGGTCTCAGATCTCTGCCTGATGCAGCAAAGTTTGCCACA

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU326112 lncRNA upstream 30192 774636 ~ 775805 (+) True G287649
TU326119 lncRNA upstream 40766 761938 ~ 765231 (+) True G287656
TU326120 lncRNA upstream 41235 759073 ~ 764762 (+) True G287657
TU326127 lncRNA upstream 63559 741461 ~ 742438 (+) True G287664
TU326184 lncRNA upstream 65728 739811 ~ 740269 (+) True G287720
TU326226 lncRNA downstream 389 811554 ~ 811757 (+) True G287757
TU326211 lncRNA downstream 1464 812629 ~ 815102 (+) True G287743
TU326207 lncRNA downstream 26235 837400 ~ 842643 (+) False G287740
TU326208 lncRNA downstream 28464 839629 ~ 842643 (+) True G287740
TU326201 lncRNA downstream 71595 882760 ~ 885894 (+) True G287735
CI01000073_00792429_00801911.mRNA mRNA upstream 3749 792429 ~ 802248 (+) True CI01000073_00792429_00801911
CI01000073_00790983_00791279.mRNA mRNA upstream 14476 790526 ~ 791521 (+) True CI01000073_00790983_00791279
CI01000073_00688992_00691075.mRNA mRNA upstream 114743 688992 ~ 691254 (+) True CI01000073_00688992_00691075
CI01000073_00638193_00673213.mRNA mRNA upstream 132296 638193 ~ 673701 (+) True CI01000073_00638193_00673213
CI01000073_00627723_00630714.mRNA mRNA upstream 174805 627723 ~ 631192 (+) True CI01000073_00627723_00630714
CI01000073_00925356_00926204.mRNA mRNA downstream 112548 923713 ~ 926721 (+) True CI01000073_00925356_00926204
CI01000073_01036546_01038321.mRNA mRNA downstream 225290 1036455 ~ 1038388 (+) True CI01000073_01036546_01038321
CI01000073_01099082_01112685.mRNA mRNA downstream 287675 1098840 ~ 1113138 (+) True CI01000073_01099082_01112685
CI01000073_01130335_01140889.mRNA mRNA downstream 318716 1129881 ~ 1142142 (+) True CI01000073_01130335_01140889
CI01000073_01161805_01169094.mRNA mRNA downstream 350640 1161805 ~ 1170873 (+) True CI01000073_01161805_01169094
TU326092 other upstream 87596 709044 ~ 718401 (+) False G287638
TU326097 other upstream 87596 709044 ~ 718401 (+) True G287638
TU325807 other upstream 606225 190944 ~ 199772 (+) True G287391
TU325739 other upstream 715274 89382 ~ 90723 (+) True G287343
TU325736 other upstream 755551 48125 ~ 50446 (+) False CI01000073_00048073_00049706

Expression Profile