Gene
RNA
| Item | Value |
|---|---|
| RNA id | CI01000304_15348138_15379777.mRNA |
| length | 3034 |
| RNA type | mRNA |
| GC content | 0.53 |
| exon number | 7 |
| gene id | CI01000304_15348138_15379777 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | CI01000304 |
| NCBI id | null |
| chromosome length | 18613800 |
| location | 15347958 ~ 15380003 (+) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| species | grasscarp (Ctenopharyngodon idella) |
| id | name | namespace |
|---|---|---|
| GO:0043565 | sequence-specific DNA binding | molecular_function |
| id | description |
|---|---|
| K07201 | FOXO1; forkhead box protein O1 |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU490188 | lncRNA | upstream | 6142 | 15339294 ~ 15341816 (+) | True | G426931 |
| TU490193 | lncRNA | upstream | 14273 | 15322016 ~ 15333685 (+) | False | G426933 |
| TU490190 | lncRNA | upstream | 14273 | 15328426 ~ 15333685 (+) | True | G426933 |
| TU490192 | lncRNA | upstream | 24373 | 15322016 ~ 15323585 (+) | False | G426933 |
| TU490212 | lncRNA | upstream | 92719 | 15253925 ~ 15255239 (+) | True | G426951 |
| TU491126 | lncRNA | downstream | 80384 | 15460387 ~ 15460626 (+) | True | G427721 |
| TU491128 | lncRNA | downstream | 110316 | 15490319 ~ 15490525 (+) | True | G427723 |
| TU491143 | lncRNA | downstream | 163014 | 15543017 ~ 15543311 (+) | True | G427737 |
| TU491145 | lncRNA | downstream | 170958 | 15550961 ~ 15551196 (+) | True | G427739 |
| TU491152 | lncRNA | downstream | 187100 | 15567103 ~ 15567331 (+) | True | G427746 |
| CI01000304_15315146_15318470.mRNA | mRNA | upstream | 27971 | 15315146 ~ 15319987 (+) | True | CI01000304_15315146_15318470 |
| CI01000304_15265823_15269133.mRNA | mRNA | upstream | 78367 | 15264968 ~ 15269591 (+) | True | CI01000304_15265823_15269133 |
| CI01000304_15231039_15234179.mRNA | mRNA | upstream | 113375 | 15231039 ~ 15234583 (+) | True | CI01000304_15231039_15234179 |
| CI01000304_15148523_15151340.mRNA | mRNA | upstream | 196563 | 15147834 ~ 15151395 (+) | True | CI01000304_15148523_15151340 |
| CI01000304_15140709_15147357.mRNA | mRNA | upstream | 200401 | 15140561 ~ 15147557 (+) | True | CI01000304_15140709_15147357 |
| CI01000304_15423818_15456305.mRNA | mRNA | downstream | 41608 | 15421611 ~ 15456881 (+) | True | CI01000304_15423818_15456305 |
| CI01000304_15462162_15465511.mRNA | mRNA | downstream | 82159 | 15462162 ~ 15465511 (+) | True | CI01000304_15462162_15465511 |
| CI01000304_15467093_15471138.mRNA | mRNA | downstream | 87090 | 15467093 ~ 15471482 (+) | True | CI01000304_15467093_15471138 |
| CI01000304_15472687_15483327.mRNA | mRNA | downstream | 92684 | 15472687 ~ 15483327 (+) | True | CI01000304_15472687_15483327 |
| CI01000304_15483378_15486113.mRNA | mRNA | downstream | 103375 | 15483378 ~ 15486386 (+) | True | CI01000304_15483378_15486113 |
| TU490061 | other | upstream | 397366 | 14948890 ~ 14950592 (+) | True | G426828 |
| TU489538 | other | upstream | 1017072 | 14330048 ~ 14330886 (+) | True | G426312 |
| TU489575 | other | upstream | 1769111 | 13556451 ~ 13573943 (+) | True | G426349 |
| TU488858 | other | upstream | 2908872 | 12436554 ~ 12436605 (+) | True | G425718 |
| TU491290 | other | downstream | 505451 | 15885454 ~ 15889591 (+) | True | G427860 |
| TU491458 | other | downstream | 703227 | 16083230 ~ 16083714 (+) | True | G428017 |
| TU491561 | other | downstream | 1124859 | 16513714 ~ 16541045 (+) | True | G428096 |
| TU491635 | other | downstream | 1375943 | 16755946 ~ 16761111 (+) | True | G428157 |
| TU491628 | other | downstream | 1630727 | 17010730 ~ 17017194 (+) | False | CI01000304_17009769_17023302 |
| species | RNA id | representative | length | rna type | GC content | exon number | chromosome id | location |
|---|---|---|---|---|---|---|---|---|
| zebrafish (Danio rerio) | TCONS_00004274 | True | 2022 | mRNA | 0.55 | 3 | NC_007121.7 | 31809226 ~ 31861474 (+) |
