RNA id: CI01000315_01010057_01020955.mRNA


Basic Information

Item Value
RNA id CI01000315_01010057_01020955.mRNA
length 864
RNA type mRNA
GC content 0.43
exon number 7
gene id CI01000315_01010057_01020955
representative False

Chromosome Information

Item Value
chromosome id CI01000315
NCBI id null
chromosome length 1797778
location 1010036 ~ 1021965 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence

GTCATTACCCTCGTTTTAACTTTATATCAGCATTTGCAGAACGAATGTTTGTGTACCTACTCAATCCTTGGCTGCATTTGTGTATGCCGGTGTAATCTGGCTGGACTCAGTGAAGATGAGAAAAAAGCGCTTTTTCTGCGCAGTCGATCTGCTGGGTTGACTGTCAGTGGATGTGCGCATGCTGTATTTGTCTGTGATCTTTTCAGATTATTAAGAAAGAAACTGAATGATGAGGATGGCTGCACTTCTAAAACGCATCTGTCTGTTGGCATACTGGGTGGAGGACACATGGGCAAACAGCTGGCAATGCTTTTACTGCATGCATCCAGCCTCAAACCATGCCACATCAACATCTCAACTAAAAGACCCGAGAGCTTAGGGGAAATTTCAAACATTGGTGTTAAGTGTTACTTCGACAACATTAGACTGGCTAAATGGGCAGACTTGCTCTTCCTCTGTGTCTTGCCCTCTCATCTTCCTCAAAGATGGGTATCAGCTGTGCTGTACAGTCTCCTCAACATGTGCACGGCAGAGAAGCTGGGGTCCGGAAAGACTCTTCGCCTGCTAAATGGACTGTTTGAGACCGGTGTTTCAACAAAAACATTTACTTATCACAGTTTTGTAAATTCACCCAGTGCATCTGATCCCAATAAACCCGACGACCTTTTTCCGTGGATCAATTTGGTTGATGCACAAAGTAAAGACACTCCATTGACTGATCTGGTGTCAAGAAGTAAAGGTTTGCGAGACTGCATTTCAATCATGTACTACAATATTTTTGCCACACAAGGCCAAAGTACATTTGAATGTGCCAAGATAACTAGAAAACTGCAAATCAAGTAAATATTGACTAGAACTAATAAA

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU513487 lncRNA downstream 74264 935525 ~ 935772 (-) True G447322
TU513477 lncRNA downstream 135495 874324 ~ 874541 (-) True G447313
TU513427 lncRNA downstream 171931 835302 ~ 838105 (-) False G447265
TU513428 lncRNA downstream 171931 835363 ~ 838105 (-) True G447265
TU513429 lncRNA downstream 180754 828532 ~ 829282 (-) True G447266
TU513456 lncRNA upstream 27805 1048760 ~ 1049187 (-) True G447293
TU513510 lncRNA upstream 47338 1068293 ~ 1071750 (-) True G447336
TU513512 lncRNA upstream 53574 1074529 ~ 1149461 (-) True G447337
TU513463 lncRNA upstream 128628 1149583 ~ 1152126 (-) True G447300
TU513553 lncRNA upstream 139177 1160132 ~ 1160432 (-) True G447357
CI01000315_01001912_01007018.mRNA mRNA downstream 3018 1001849 ~ 1007018 (-) True CI01000315_01001912_01007018
CI01000315_00991692_00998577.mRNA mRNA downstream 11459 991437 ~ 998577 (-) True CI01000315_00991692_00998577
CI01000315_00973185_00985720.mRNA mRNA downstream 24316 973028 ~ 985720 (-) True CI01000315_00973185_00985720
CI01000315_00936612_00946276.mRNA mRNA downstream 62952 936170 ~ 947084 (-) True CI01000315_00936612_00946276
CI01000315_00912164_00920580.mRNA mRNA downstream 89456 911888 ~ 920580 (-) True CI01000315_00912164_00920580
CI01000315_01023268_01038848.mRNA mRNA upstream 2219 1023174 ~ 1038848 (-) True CI01000315_01023268_01038848
CI01000315_01082437_01097575.mRNA mRNA upstream 60989 1081944 ~ 1097575 (-) True CI01000315_01082437_01097575
CI01000315_01103575_01108954.mRNA mRNA upstream 82261 1103216 ~ 1108954 (-) True CI01000315_01103575_01108954
CI01000315_01166953_01176898.mRNA mRNA upstream 145688 1166643 ~ 1176898 (-) True CI01000315_01166953_01176898
CI01000315_01181862_01186477.mRNA mRNA upstream 160657 1181612 ~ 1186477 (-) True CI01000315_01181862_01186477
TU512771 other downstream 732885 273823 ~ 275584 (-) True G446682
TU513576 other upstream 308053 1329008 ~ 1330164 (-) True G447377

Expression Profile