RNA id: TCONS_00021301


Basic Information

Item Value
RNA id TCONS_00021301
length 530
RNA type processed_transcript
GC content 0.44
exon number 5
gene id XLOC_010885
representative False

Chromosome Information

Item Value
chromosome id NC_007127.7
NCBI id CM002900.2
chromosome length 55266484
location 36578495 ~ 36610636 (-)
genome version GRCz11_2017_zebrafish_Genome
species zebrafish
(Danio rerio)

Sequence

CAGACGCATGTATTGAGGAACTCTTCATTTGATACTTAGACAAGGCAAAAACTCAGATAATTAACTGCAGTAAACTCATTTATACGCCCTAGAGAGCGTTATTTACTGctaataaatggaaaaaagtatGTTTCATGTTCCCGGTCCTTCCGGACAAAGAAGGCCGCCATGTAGACAGAGGATAGGGCCTTCTCCTGGTTCTGTGGAAGTAAAATATAACCTGAAAGAAAATATTGGAGCTGGCTGCTACGGCAATGTCTATCGTGGTATCAGAATAGTGGACGGCAAACAGTTTATCATCAAGTCGACTTTTTCAGAAGTTGACAGCAATGTGCCTGGATATCCGTTACCCATACCAATCGAAGTGGCCATGATGACAATTGCGAGAGATCCCCCAAGCCCGCTGCTCATCAAGCTCCAGGAATGGTTTTTAGTTAAAGTGGAGAAATTGCCAAGAGGAAAAGTGTGTAAGACAATAATGTTGGTGATGGAGTATCTCGGCCCGTGCAGAACACTGGAGGATTTCCTGC

Function

GO:

id name namespace
GO:0061134 peptidase regulator activity molecular_function
GO:0061135 endopeptidase regulator activity molecular_function
GO:0030414 peptidase inhibitor activity molecular_function
GO:0004857 enzyme inhibitor activity molecular_function
GO:0004866 endopeptidase inhibitor activity molecular_function

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

Ensembl:

ensembl_id ENSDART00000137632

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TCONS_00022210 lncRNA downstream 8301 36580443 ~ 36599740 (-) True XLOC_010886
TCONS_00022208 lncRNA downstream 28383 36578495 ~ 36579658 (-) False XLOC_010885
TCONS_00022207 lncRNA downstream 28460 36578495 ~ 36579581 (-) False XLOC_010885
TCONS_00021823 lncRNA downstream 37574 36507489 ~ 36570467 (-) False XLOC_010884
TCONS_00021824 lncRNA downstream 37574 36514044 ~ 36570467 (-) True XLOC_010884
TCONS_00021307 lncRNA upstream 170023 36780659 ~ 36784973 (-) True XLOC_010888
TCONS_00021316 lncRNA upstream 329091 36939727 ~ 36941953 (-) True XLOC_010891
TCONS_00021825 lncRNA upstream 346114 36956750 ~ 36959179 (-) True XLOC_010892
TCONS_00021318 lncRNA upstream 366420 36977056 ~ 36979597 (-) True XLOC_010893
TCONS_00021322 lncRNA upstream 557834 37168470 ~ 37225747 (-) False XLOC_010895
TCONS_00021300 mRNA downstream 411341 36167907 ~ 36196700 (-) True XLOC_010880
TCONS_00021298 mRNA downstream 489527 36095582 ~ 36118514 (-) False XLOC_010879
TCONS_00021299 mRNA downstream 508549 36095663 ~ 36099492 (-) True XLOC_010879
TCONS_00021297 mRNA downstream 514265 36072329 ~ 36093776 (-) True XLOC_010878
TCONS_00021296 mRNA downstream 543898 36038130 ~ 36064143 (-) False XLOC_010878
TCONS_00021303 mRNA upstream 110594 36721230 ~ 36748374 (-) False XLOC_010887
TCONS_00021305 mRNA upstream 110991 36721627 ~ 36746837 (-) False XLOC_010887
TCONS_00021304 mRNA upstream 110991 36721627 ~ 36746837 (-) True XLOC_010887
TCONS_00021306 mRNA upstream 155298 36765934 ~ 36798783 (-) False XLOC_010888
TCONS_00021308 mRNA upstream 197288 36807924 ~ 36834535 (-) False XLOC_010889
TCONS_00021294 other downstream 632884 35945384 ~ 35975157 (-) True XLOC_010876
TCONS_00021291 other downstream 783333 35821991 ~ 35824708 (-) True XLOC_010875
TCONS_00021290 other downstream 783962 35821321 ~ 35824079 (-) False XLOC_010875
TCONS_00021289 other downstream 784095 35821321 ~ 35823946 (-) False XLOC_010875
TCONS_00021283 other downstream 1184041 35420564 ~ 35424000 (-) True XLOC_010872
TCONS_00021311 other upstream 203587 36814223 ~ 36829185 (-) True XLOC_010889
TCONS_00021319 other upstream 546369 37157005 ~ 37157121 (-) True XLOC_010894
TCONS_00021337 other upstream 1951891 38562527 ~ 38562644 (-) True XLOC_010904
TCONS_00021338 other upstream 1967793 38578429 ~ 38583862 (-) False XLOC_010903
TCONS_00021340 other upstream 1972130 38582766 ~ 38629131 (-) False XLOC_010903

Expression Profile

//