RNA id: TU807217



Basic Information


Item Value
RNA id TU807217
length 244
lncRNA type inter_gene
GC content 0.37
exon number 1
gene id G685743
representative True

Chromosome Information


Item Value
chromosome id CI01180000
NCBI id null
chromosome length 11503085
location 10619499 ~ 10619742 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence


TCTCGTCGCTTTATAACATTAAGGTTAAACCACTGTACTCACATTAACTGTTTTAAATACGTCTTTAGTAGCTTTCTGGGCATTGAAAGTGCTAATTATCTTGCTGGCAATGCAGGCCTCACTGAGCCATTGGATTTTATGAAAGATATCTTAATTTGTGTTCTGAAGATGAACGAACATCTTACGGGTGTGGAACGGCATGAAGGTGAGTAATTAATGACAGAATTTTCATTTTTGGGTAAAC

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU807204 lncRNA downstream 20615 10598660 ~ 10598884 (-) True G685730
TU807202 lncRNA downstream 22131 10596993 ~ 10597368 (-) True G685728
TU807191 lncRNA downstream 64056 10555239 ~ 10555443 (-) True G685717
TU807183 lncRNA downstream 88639 10530586 ~ 10530860 (-) True G685709
TU807103 lncRNA downstream 283620 10335641 ~ 10335879 (-) True G685631
TU807220 lncRNA upstream 6558 10626300 ~ 10626784 (-) True G685746
TU807265 lncRNA upstream 89841 10709583 ~ 10710033 (-) True G685788
TU807312 lncRNA upstream 153735 10773477 ~ 10773864 (-) True G685834
TU807386 lncRNA upstream 269861 10889603 ~ 10890254 (-) True G685908
TU807403 lncRNA upstream 306687 10926429 ~ 10996548 (-) True G685923
CI01180000_10538157_10538596.mRNA mRNA downstream 80903 10537077 ~ 10538596 (-) True CI01180000_10538157_10538596
CI01180000_10521190_10523609.mRNA mRNA downstream 95874 10520833 ~ 10523625 (-) True CI01180000_10521190_10523609
CI01180000_10449079_10461033.mRNA mRNA downstream 158466 10448988 ~ 10461033 (-) True CI01180000_10449079_10461033
CI01180000_10441696_10442635.mRNA mRNA downstream 176833 10441647 ~ 10442666 (-) True CI01180000_10441696_10442635
CI01180000_10373880_10377493.mRNA mRNA downstream 240763 10373030 ~ 10378736 (-) True CI01180000_10373880_10377493
CI01180000_10785561_10788308.mRNA mRNA upstream 165045 10784787 ~ 10789157 (-) True CI01180000_10785561_10788308
CI01180000_11077923_11087065.mRNA mRNA upstream 458181 11077923 ~ 11087065 (-) False CI01180000_11077923_11087065
CI01180000_11091600_11093609.mRNA mRNA upstream 471580 11091322 ~ 11093690 (-) True CI01180000_11091600_11093609
CI01180000_11098239_11100667.mRNA mRNA upstream 477994 11097736 ~ 11100667 (-) True CI01180000_11098239_11100667
CI01180000_11106711_11107109.mRNA mRNA upstream 486724 11106466 ~ 11107894 (-) True CI01180000_11106711_11107109
TU806323 other downstream 718111 9898424 ~ 9901388 (-) True G684929
TU805835 other downstream 1895632 8722693 ~ 8723867 (-) True G684493
TU805466 other downstream 2708291 7910761 ~ 7911208 (-) False G684182
TU805357 other downstream 3036696 7579404 ~ 7582803 (-) True G684080
TU805347 other downstream 3093845 7506890 ~ 7525654 (-) True G684071
TU807544 other upstream 721874 11341616 ~ 11343496 (-) True G686052

Expression Profile