RNA id: TU807386


Basic Information

Item Value
RNA id TU807386
length 210
lncRNA type inter_gene
GC content 0.38
exon number 2
gene id G685908
representative True

Chromosome Information

Item Value
chromosome id CI01180000
NCBI id null
chromosome length 11503085
location 10889603 ~ 10890254 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence

TTGGAATCTGACAAAAAATGTCTGAGCTACATCTGTTTGAAGTCGATAGAGTCAGCAAAGTCATAAAAATTGAGTTAAAGTTTTCTGAAGGTTCCAAAACAAAATCACCTAGCAACCAGACCTTAAAATCCATGGTAATACCACCAAATTTGCCACAAGTCGTACAGAAGCGAGCAGACAAAAACGGCATTTTTCATGGACAAAGGAAAG

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU807312 lncRNA downstream 115739 10773477 ~ 10773864 (-) True G685834
TU807265 lncRNA downstream 179570 10709583 ~ 10710033 (-) True G685788
TU807220 lncRNA downstream 262819 10626300 ~ 10626784 (-) True G685746
TU807217 lncRNA downstream 269861 10619499 ~ 10619742 (-) True G685743
TU807204 lncRNA downstream 290719 10598660 ~ 10598884 (-) True G685730
TU807403 lncRNA upstream 36175 10926429 ~ 10996548 (-) True G685923
TU807419 lncRNA upstream 62180 10952434 ~ 10970182 (-) True G685937
TU807435 lncRNA upstream 89994 10980248 ~ 10983846 (-) True G685953
TU807443 lncRNA upstream 116804 11007058 ~ 11007317 (-) True G685961
TU807473 lncRNA upstream 196371 11086625 ~ 11086950 (-) True G685987
CI01180000_10785561_10788308.mRNA mRNA downstream 100446 10784787 ~ 10789157 (-) True CI01180000_10785561_10788308
CI01180000_10538157_10538596.mRNA mRNA downstream 351007 10537077 ~ 10538596 (-) True CI01180000_10538157_10538596
CI01180000_10521190_10523609.mRNA mRNA downstream 365978 10520833 ~ 10523625 (-) True CI01180000_10521190_10523609
CI01180000_10449079_10461033.mRNA mRNA downstream 428570 10448988 ~ 10461033 (-) True CI01180000_10449079_10461033
CI01180000_10441696_10442635.mRNA mRNA downstream 446937 10441647 ~ 10442666 (-) True CI01180000_10441696_10442635
CI01180000_11077923_11087065.mRNA mRNA upstream 187669 11077923 ~ 11087065 (-) False CI01180000_11077923_11087065
CI01180000_11091600_11093609.mRNA mRNA upstream 201068 11091322 ~ 11093690 (-) True CI01180000_11091600_11093609
CI01180000_11098239_11100667.mRNA mRNA upstream 207482 11097736 ~ 11100667 (-) True CI01180000_11098239_11100667
CI01180000_11106711_11107109.mRNA mRNA upstream 216212 11106466 ~ 11107894 (-) True CI01180000_11106711_11107109
CI01180000_11111159_11112550.mRNA mRNA upstream 220547 11110801 ~ 11112550 (-) True CI01180000_11111159_11112550
TU806323 other downstream 988215 9898424 ~ 9901388 (-) True G684929
TU805835 other downstream 2165736 8722693 ~ 8723867 (-) True G684493
TU805466 other downstream 2978395 7910761 ~ 7911208 (-) False G684182
TU805357 other downstream 3306800 7579404 ~ 7582803 (-) True G684080
TU805347 other downstream 3363949 7506890 ~ 7525654 (-) True G684071
TU807544 other upstream 451362 11341616 ~ 11343496 (-) True G686052

Expression Profile