RNA id: TCONS_00021835


Basic Information

Item Value
RNA id TCONS_00021835
length 365
lncRNA type sense_over
GC content 0.42
exon number 5
gene id XLOC_011018
representative False

Chromosome Information

Item Value
chromosome id NC_007127.7
NCBI id CM002900.2
chromosome length 55266484
location 45228101 ~ 45235947 (-)
genome version GRCz11_2017_zebrafish_Genome
species zebrafish
(Danio rerio)

Sequence

TCACAGAACTAGTTCTCCTAACAGTCTTCTTGGCACTGTTCAGTCGAGCAGAAGCAAATCCTTTTGTTTACAacTATGAGGCGCTGAGGATCGGGGGTTTGGTCTTCACATGTGTGCTTGTAGCAGGAGCTGTTACAGCTCTGTGTTGGGGGCAGTGCAAACCAAAAAGAAAGTAGGTCACCTGAGCTGTCGGTCACACTCGTGCTTTTAAATCGCAGTAAAATGATGTACATTTCAAGATCACAACATTTTTGGGGAATTTTTGGTGGtgtttttgaaaatatgcatCTTATTTGACAGGCATGATGATGACGCAAGCAAAATCTAATGATTATGATCTGGAACTTCATCAGCTGAAAACTTTC

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TCONS_00022238 lncRNA downstream 129738 45087971 ~ 45098706 (-) True XLOC_011009
TCONS_00022237 lncRNA downstream 213964 45012914 ~ 45014480 (-) True XLOC_011004
TCONS_00021492 lncRNA downstream 554684 44669393 ~ 44673760 (-) True XLOC_010996
TCONS_00021491 lncRNA downstream 559684 44665604 ~ 44668760 (-) False XLOC_010996
TCONS_00021485 lncRNA downstream 932954 44257469 ~ 44295490 (-) True XLOC_010993
TCONS_00021524 lncRNA upstream 85478 45316190 ~ 45322513 (-) True XLOC_011021
TCONS_00022239 lncRNA upstream 561673 45792385 ~ 45795127 (-) True XLOC_011023
TCONS_00022240 lncRNA upstream 751761 45982473 ~ 45984353 (-) False XLOC_011027
TCONS_00022244 lncRNA upstream 751761 45982473 ~ 45990842 (-) False XLOC_011027
TCONS_00022246 lncRNA upstream 751761 45982473 ~ 45990842 (-) False XLOC_011027
TCONS_00021516 mRNA downstream 2924 45202602 ~ 45225520 (-) False XLOC_011017
TCONS_00021517 mRNA downstream 18760 45207587 ~ 45209684 (-) True XLOC_011017
TCONS_00021513 mRNA downstream 50014 45172793 ~ 45178430 (-) True XLOC_011014
TCONS_00021512 mRNA downstream 76275 45149355 ~ 45152169 (-) True XLOC_011013
TCONS_00021508 mRNA downstream 133845 45087810 ~ 45094599 (-) False XLOC_011009
TCONS_00021522 mRNA upstream 18343 45249055 ~ 45288599 (-) True XLOC_011020
TCONS_00021523 mRNA upstream 72384 45303096 ~ 45327616 (-) False XLOC_011021
TCONS_00021525 mRNA upstream 133441 45364153 ~ 45398408 (-) True XLOC_011022
TCONS_00021526 mRNA upstream 565890 45796602 ~ 45854882 (-) False XLOC_011024
TCONS_00021527 mRNA upstream 566314 45797026 ~ 45854882 (-) True XLOC_011024
TCONS_00021515 other downstream 35292 45186673 ~ 45193152 (-) True XLOC_011016
TCONS_00021514 other downstream 53884 45174446 ~ 45174560 (-) True XLOC_011015
TCONS_00021511 other downstream 84072 45140858 ~ 45144372 (-) True XLOC_011012
TCONS_00021510 other downstream 93965 45130921 ~ 45134479 (-) True XLOC_011011
TCONS_00021509 other downstream 121870 45104613 ~ 45106574 (-) True XLOC_011010
TCONS_00021521 other upstream 11669 45242381 ~ 45245742 (-) True XLOC_011019
TCONS_00021532 other upstream 986096 46216808 ~ 46216909 (-) True XLOC_011030
TCONS_00021533 other upstream 1109831 46340543 ~ 46340657 (-) True XLOC_011031
TCONS_00021580 other upstream 2712431 47943143 ~ 47943257 (-) True XLOC_011054
TCONS_00021592 other upstream 4764766 49995478 ~ 49995594 (-) True XLOC_011068

Expression Profile

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