Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_021590107.2 |
| length | 1007 |
| RNA type | mRNA |
| GC content | 0.42 |
| exon number | 5 |
| gene id | LOC110509134 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048567.1 |
| NCBI id | CM023221.2 |
| chromosome length | 85311031 |
| location | 11365423 ~ 11368231 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| id | name | namespace |
|---|---|---|
| GO:0006914 | autophagy | biological_process |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU256882 | lncRNA | downstream | 7007 | 11358172 ~ 11358416 (-) | True | G224679 |
| TU256879 | lncRNA | downstream | 12397 | 11346661 ~ 11353026 (-) | True | G224676 |
| TU256047 | lncRNA | downstream | 86795 | 11275917 ~ 11278628 (-) | False | G223969 |
| TU256048 | lncRNA | downstream | 86795 | 11275917 ~ 11278628 (-) | True | G223969 |
| TU256004 | lncRNA | downstream | 140593 | 11216565 ~ 11224830 (-) | True | G223949 |
| TU256897 | lncRNA | upstream | 22792 | 11391023 ~ 11392426 (-) | False | G224692 |
| TU256899 | lncRNA | upstream | 22792 | 11391023 ~ 11392022 (-) | False | G224692 |
| TU256902 | lncRNA | upstream | 22934 | 11391165 ~ 11392022 (-) | True | G224692 |
| TU256903 | lncRNA | upstream | 24383 | 11392614 ~ 11393104 (-) | True | G224693 |
| TU256910 | lncRNA | upstream | 39369 | 11407600 ~ 11407909 (-) | True | G224699 |
| XM_021590085.2 | mRNA | downstream | 1578 | 11359013 ~ 11363845 (-) | True | LOC110509113 |
| XM_036968754.1 | mRNA | downstream | 200453 | 11151396 ~ 11164970 (-) | True | rasip1 |
| XM_021589998.2 | mRNA | downstream | 278294 | 11079975 ~ 11087129 (-) | True | LOC110509048 |
| XM_036968745.1 | mRNA | downstream | 279949 | 11079975 ~ 11085474 (-) | False | LOC110509048 |
| XM_021590011.2 | mRNA | downstream | 285853 | 11068525 ~ 11079570 (-) | False | znf628 |
| XM_036968814.1 | mRNA | upstream | 2401 | 11370632 ~ 11386718 (-) | True | LOC110510606 |
| XM_021590140.2 | mRNA | upstream | 56562 | 11424793 ~ 11432989 (-) | True | styk1b |
| XM_021590196.2 | mRNA | upstream | 64887 | 11433118 ~ 11436182 (-) | False | LOC110509171 |
| XM_021590151.2 | mRNA | upstream | 64887 | 11433118 ~ 11436222 (-) | False | LOC110509171 |
| XM_036968881.1 | mRNA | upstream | 64887 | 11433118 ~ 11436480 (-) | False | LOC110509171 |
| TU256045 | other | downstream | 86795 | 11275917 ~ 11278628 (-) | False | G223969 |
| TU255996 | other | downstream | 191056 | 11172120 ~ 11174367 (-) | True | G223942 |
| TU255954 | other | downstream | 291673 | 11070946 ~ 11073750 (-) | False | znf628 |
| TU254793 | other | downstream | 1342220 | 10020648 ~ 10023203 (-) | False | LOC110508724 |
| TU257101 | other | upstream | 359131 | 11727362 ~ 11741584 (-) | True | LOC110509576 |
| TU257113 | other | upstream | 384620 | 11752851 ~ 11753680 (-) | False | G224869 |
| TU257114 | other | upstream | 384620 | 11752851 ~ 11753680 (-) | False | G224869 |
| TU257115 | other | upstream | 384620 | 11752851 ~ 11753680 (-) | True | G224869 |
| TU257122 | other | upstream | 427659 | 11795890 ~ 11796309 (-) | True | G224873 |
