Gene
RNA
| Item | Value |
|---|---|
| RNA id | TCONS_00028995 |
| length | 7039 |
| RNA type | mRNA |
| GC content | 0.37 |
| exon number | 27 |
| gene id | XLOC_014677 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_007130.7 |
| NCBI id | CM002903.2 |
| chromosome length | 48449771 |
| location | 17834204 ~ 17996336 (-) |
| genome version | GRCz11_2017_zebrafish_Genome |
| species | zebrafish (Danio rerio) |
| id | name | namespace |
|---|---|---|
| GO:1903371 | regulation of endoplasmic reticulum tubular network organization | biological_process |
| GO:0006302 | double-strand break repair | biological_process |
| GO:0022402 | cell cycle process | biological_process |
| GO:1903373 | positive regulation of endoplasmic reticulum tubular network organization | biological_process |
| GO:0006335 | DNA replication-dependent nucleosome assembly | biological_process |
| GO:0034723 | DNA replication-dependent nucleosome organization | biological_process |
| GO:0006996 | organelle organization | biological_process |
| GO:0033043 | regulation of organelle organization | biological_process |
| GO:0071786 | endoplasmic reticulum tubular network organization | biological_process |
| GO:0098826 | endoplasmic reticulum tubular network membrane | cellular_component |
| GO:0044424 | obsolete intracellular part | cellular_component |
| GO:0043596 | nuclear replication fork | cellular_component |
| GO:0005622 | intracellular anatomical structure | cellular_component |
| GO:0005657 | replication fork | cellular_component |
| id | description |
|---|---|
| ZDB-GENE-050522-556 | Predicted to be involved in snRNA 3'-end processing. Predicted to be located in nucleus. Predicted to be part of integrator complex. Orthologous to human INTS8 (integrator complex subunit 8). |
| ensembl_id | ENSDART00000186143 |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TCONS_00030192 | lncRNA | downstream | 480036 | 17353644 ~ 17354733 (-) | True | XLOC_014673 |
| TCONS_00030191 | lncRNA | downstream | 505716 | 17322000 ~ 17329053 (-) | True | XLOC_014672 |
| TCONS_00030190 | lncRNA | downstream | 512889 | 17321542 ~ 17321880 (-) | True | XLOC_014671 |
| TCONS_00030189 | lncRNA | downstream | 556962 | 17275458 ~ 17277807 (-) | True | XLOC_014669 |
| TCONS_00029771 | lncRNA | downstream | 603749 | 17224646 ~ 17231020 (-) | True | XLOC_014668 |
| TCONS_00030193 | lncRNA | upstream | 141378 | 18137714 ~ 18139390 (-) | False | XLOC_014680 |
| TCONS_00029772 | lncRNA | upstream | 141378 | 18137714 ~ 18139894 (-) | True | XLOC_014680 |
| TCONS_00029014 | lncRNA | upstream | 315176 | 18311512 ~ 18313300 (-) | True | XLOC_014682 |
| TCONS_00029015 | lncRNA | upstream | 317992 | 18314328 ~ 18315321 (-) | True | XLOC_014683 |
| TCONS_00029016 | lncRNA | upstream | 366981 | 18363317 ~ 18364965 (-) | True | XLOC_014684 |
| TCONS_00028992 | mRNA | downstream | 59885 | 17688350 ~ 17774884 (-) | False | XLOC_014676 |
| TCONS_00028993 | mRNA | downstream | 59894 | 17745256 ~ 17774875 (-) | True | XLOC_014676 |
| TCONS_00028986 | mRNA | downstream | 176516 | 17514631 ~ 17658253 (-) | False | XLOC_014675 |
| TCONS_00029002 | mRNA | upstream | 121985 | 18118321 ~ 18127808 (-) | False | XLOC_014678 |
| TCONS_00029004 | mRNA | upstream | 121985 | 18118321 ~ 18130567 (-) | False | XLOC_014678 |
| TCONS_00029003 | mRNA | upstream | 121985 | 18118321 ~ 18130567 (-) | False | XLOC_014678 |
| TCONS_00029005 | mRNA | upstream | 122026 | 18118362 ~ 18127629 (-) | True | XLOC_014678 |
| TCONS_00029006 | mRNA | upstream | 135176 | 18131512 ~ 18136410 (-) | False | XLOC_014679 |
| TCONS_00028989 | other | downstream | 176596 | 17518061 ~ 17658173 (-) | False | XLOC_014675 |
| TCONS_00028991 | other | downstream | 308034 | 17518733 ~ 17526735 (-) | True | XLOC_014675 |
| TCONS_00028976 | other | downstream | 624034 | 17208245 ~ 17210735 (-) | True | XLOC_014667 |
| TCONS_00028972 | other | downstream | 835027 | 16999627 ~ 16999742 (-) | True | XLOC_014664 |
| TCONS_00028964 | other | downstream | 1805326 | 16029308 ~ 16029443 (-) | True | XLOC_014660 |
| TCONS_00029018 | other | upstream | 420845 | 18417181 ~ 18418763 (-) | False | XLOC_014685 |
| TCONS_00029036 | other | upstream | 838391 | 18834727 ~ 18834857 (-) | True | XLOC_014693 |
| TCONS_00029037 | other | upstream | 842075 | 18838411 ~ 18838541 (-) | True | XLOC_014694 |
| TCONS_00029038 | other | upstream | 845077 | 18841413 ~ 18841543 (-) | True | XLOC_014695 |
| TCONS_00029041 | other | upstream | 857721 | 18854057 ~ 18855476 (-) | True | XLOC_014696 |
