Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU294334 |
| length | 295 |
| lncRNA type | sense_over |
| GC content | 0.43 |
| exon number | 3 |
| gene id | G258539 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048567.1 |
| NCBI id | CM023221.2 |
| chromosome length | 85311031 |
| location | 42019252 ~ 42070212 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU294332 | lncRNA | upstream | 2229 | 42016740 ~ 42017023 (+) | True | G258538 |
| TU294188 | lncRNA | upstream | 53974 | 41922501 ~ 41965278 (+) | False | LOC110519974 |
| TU294190 | lncRNA | upstream | 53974 | 41955383 ~ 41965278 (+) | True | LOC110519974 |
| TU294235 | lncRNA | upstream | 169021 | 41850004 ~ 41850231 (+) | True | G258447 |
| TU294234 | lncRNA | upstream | 169489 | 41849351 ~ 41849763 (+) | True | G258446 |
| TU294456 | lncRNA | downstream | 157454 | 42227666 ~ 42227968 (+) | True | G258650 |
| TU294463 | lncRNA | downstream | 162893 | 42233105 ~ 42233311 (+) | True | G258657 |
| TU294470 | lncRNA | downstream | 171651 | 42241863 ~ 42242082 (+) | True | G258664 |
| TU294492 | lncRNA | downstream | 254259 | 42324471 ~ 42327172 (+) | True | G258682 |
| TU294595 | lncRNA | downstream | 373652 | 42443864 ~ 42444118 (+) | True | G258784 |
| XM_021596904.2 | mRNA | upstream | 54011 | 41942099 ~ 41965241 (+) | False | LOC110519974 |
| XM_021596903.2 | mRNA | upstream | 54014 | 41942099 ~ 41965238 (+) | False | LOC110519974 |
| XM_021596905.2 | mRNA | upstream | 54018 | 41955429 ~ 41965234 (+) | False | LOC110519974 |
| XM_036974100.1 | mRNA | upstream | 60645 | 41942099 ~ 41958607 (+) | False | LOC110519974 |
| XM_021596902.2 | mRNA | upstream | 103930 | 41786953 ~ 41915322 (+) | False | spegb |
| XM_021596910.2 | mRNA | downstream | 105669 | 42175881 ~ 42205548 (+) | False | LOC110519977 |
| XM_036974103.1 | mRNA | downstream | 121959 | 42192171 ~ 42205548 (+) | True | LOC110519977 |
| XM_036974101.1 | mRNA | downstream | 126254 | 42196466 ~ 42198481 (+) | True | LOC110519976 |
| XM_036974114.1 | mRNA | downstream | 391325 | 42461537 ~ 42527912 (+) | False | LOC110519988 |
| XM_036974113.1 | mRNA | downstream | 391327 | 42461539 ~ 42527912 (+) | False | LOC110519988 |
| TU292451 | other | upstream | 1567072 | 40440069 ~ 40452180 (+) | False | LOC110519969 |
| TU292452 | other | upstream | 1567072 | 40440069 ~ 40452180 (+) | True | LOC110519969 |
| TU290915 | other | upstream | 2351164 | 39659059 ~ 39668088 (+) | True | LOC110519960 |
| TU290310 | other | upstream | 3174696 | 38843510 ~ 38844556 (+) | True | G254816 |
| TU289899 | other | upstream | 3418386 | 38600487 ~ 38600866 (+) | True | G254445 |
| TU297744 | other | downstream | 2181857 | 44252069 ~ 44252551 (+) | True | G261749 |
| TU298041 | other | downstream | 2450207 | 44520419 ~ 44525408 (+) | True | G262037 |
| TU299672 | other | downstream | 3768709 | 45838921 ~ 45839480 (+) | True | G263547 |
| TU299841 | other | downstream | 3863907 | 45934119 ~ 45934418 (+) | True | G263710 |
| TU299866 | other | downstream | 4005272 | 46075484 ~ 46079425 (+) | True | G263733 |
