Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU294190 |
| length | 830 |
| lncRNA type | sense_over |
| GC content | 0.43 |
| exon number | 3 |
| gene id | LOC110519974 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048567.1 |
| NCBI id | CM023221.2 |
| chromosome length | 85311031 |
| location | 41922501 ~ 41965278 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU294235 | lncRNA | upstream | 105152 | 41850004 ~ 41850231 (+) | True | G258447 |
| TU294234 | lncRNA | upstream | 105620 | 41849351 ~ 41849763 (+) | True | G258446 |
| TU294233 | lncRNA | upstream | 106392 | 41848731 ~ 41848991 (+) | True | G258445 |
| TU294232 | lncRNA | upstream | 108011 | 41847082 ~ 41847372 (+) | True | G258444 |
| TU294231 | lncRNA | upstream | 109723 | 41845446 ~ 41845660 (+) | True | G258443 |
| TU294332 | lncRNA | downstream | 51462 | 42016740 ~ 42017023 (+) | True | G258538 |
| TU294334 | lncRNA | downstream | 53974 | 42019252 ~ 42070212 (+) | True | G258539 |
| TU294456 | lncRNA | downstream | 262388 | 42227666 ~ 42227968 (+) | True | G258650 |
| TU294463 | lncRNA | downstream | 267827 | 42233105 ~ 42233311 (+) | True | G258657 |
| TU294470 | lncRNA | downstream | 276585 | 42241863 ~ 42242082 (+) | True | G258664 |
| XM_021596902.2 | mRNA | upstream | 40061 | 41786953 ~ 41915322 (+) | False | spegb |
| XM_036974099.1 | mRNA | upstream | 40061 | 41842513 ~ 41915322 (+) | True | spegb |
| XM_021596901.2 | mRNA | upstream | 187771 | 41740090 ~ 41767612 (+) | True | LOC110519972 |
| XM_021596899.2 | mRNA | upstream | 229628 | 41554471 ~ 41725755 (+) | True | LOC110519971 |
| LOC118944668 | mRNA | upstream | 1094203 | 40858297 ~ 40861180 (+) | True | LOC118944668 |
| XM_021596908.2 | mRNA | downstream | 21977 | 41987255 ~ 42160686 (+) | False | LOC110519975 |
| XM_021596906.2 | mRNA | downstream | 98566 | 42063844 ~ 42160686 (+) | False | LOC110519975 |
| XM_021596907.2 | mRNA | downstream | 98566 | 42063844 ~ 42160686 (+) | True | LOC110519975 |
| XM_021596910.2 | mRNA | downstream | 210603 | 42175881 ~ 42205548 (+) | False | LOC110519977 |
| XM_036974103.1 | mRNA | downstream | 226893 | 42192171 ~ 42205548 (+) | True | LOC110519977 |
| TU292451 | other | upstream | 1503203 | 40440069 ~ 40452180 (+) | False | LOC110519969 |
| TU292452 | other | upstream | 1503203 | 40440069 ~ 40452180 (+) | True | LOC110519969 |
| TU290915 | other | upstream | 2287295 | 39659059 ~ 39668088 (+) | True | LOC110519960 |
| TU290310 | other | upstream | 3110827 | 38843510 ~ 38844556 (+) | True | G254816 |
| TU289899 | other | upstream | 3354517 | 38600487 ~ 38600866 (+) | True | G254445 |
| TU297744 | other | downstream | 2286791 | 44252069 ~ 44252551 (+) | True | G261749 |
| TU298041 | other | downstream | 2555141 | 44520419 ~ 44525408 (+) | True | G262037 |
| TU299672 | other | downstream | 3873643 | 45838921 ~ 45839480 (+) | True | G263547 |
| TU299841 | other | downstream | 3968841 | 45934119 ~ 45934418 (+) | True | G263710 |
| TU299866 | other | downstream | 4110206 | 46075484 ~ 46079425 (+) | True | G263733 |
