Gene
RNA
| Item | Value |
|---|---|
| RNA id | TCONS_00034953 |
| length | 1026 |
| RNA type | mRNA |
| GC content | 0.41 |
| exon number | 1 |
| gene id | XLOC_017624 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_007131.7 |
| NCBI id | CM002904.2 |
| chromosome length | 55201332 |
| location | 46183505 ~ 46184530 (+) |
| genome version | GRCz11_2017_zebrafish_Genome |
| species | zebrafish (Danio rerio) |
| id | name | namespace |
|---|---|---|
| GO:0007186 | G protein-coupled receptor signaling pathway | biological_process |
| GO:0007165 | signal transduction | biological_process |
| GO:0016020 | membrane | cellular_component |
| GO:0016021 | integral component of membrane | cellular_component |
| GO:0004930 | G protein-coupled receptor activity | molecular_function |
| GO:0001594 | trace-amine receptor activity | molecular_function |
| id | description |
|---|---|
| ZDB-GENE-041014-65 | Predicted to enable trace-amine receptor activity. Predicted to act upstream of or within G protein-coupled receptor signaling pathway. Predicted to be located in plasma membrane. Predicted to be integral component of membrane. Orthologous to human TAAR2 (trace amine associated receptor 2) and TAAR5 (trace amine associated receptor 5). |
| ensembl_id | ENSDART00000060799 |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TCONS_00036688 | lncRNA | upstream | 140100 | 46039591 ~ 46043405 (+) | False | XLOC_017620 |
| TCONS_00034949 | lncRNA | upstream | 140100 | 46040712 ~ 46043405 (+) | True | XLOC_017620 |
| TCONS_00036686 | lncRNA | upstream | 187073 | 45987943 ~ 45996432 (+) | False | XLOC_017619 |
| TCONS_00034967 | lncRNA | downstream | 93376 | 46277906 ~ 46279478 (+) | True | XLOC_017637 |
| TCONS_00036689 | lncRNA | downstream | 167383 | 46351913 ~ 46357028 (+) | True | XLOC_017642 |
| TCONS_00036690 | lncRNA | downstream | 177921 | 46362451 ~ 46367708 (+) | False | XLOC_017643 |
| TCONS_00036691 | lncRNA | downstream | 178144 | 46362674 ~ 46367708 (+) | True | XLOC_017643 |
| TCONS_00036692 | lncRNA | downstream | 183916 | 46368446 ~ 46371615 (+) | False | XLOC_017644 |
| TCONS_00034952 | mRNA | upstream | 5913 | 46176565 ~ 46177592 (+) | True | XLOC_017623 |
| TCONS_00034951 | mRNA | upstream | 9831 | 46172649 ~ 46173674 (+) | True | XLOC_017622 |
| TCONS_00034950 | mRNA | upstream | 50594 | 46131812 ~ 46132911 (+) | True | XLOC_017621 |
| TCONS_00034948 | mRNA | upstream | 140100 | 46040666 ~ 46043405 (+) | False | XLOC_017620 |
| TCONS_00034944 | mRNA | upstream | 284356 | 45893173 ~ 45899149 (+) | True | XLOC_017615 |
| TCONS_00034954 | mRNA | downstream | 7100 | 46191630 ~ 46192655 (+) | True | XLOC_017625 |
| TCONS_00034955 | mRNA | downstream | 17658 | 46202188 ~ 46203215 (+) | True | XLOC_017626 |
| TCONS_00034956 | mRNA | downstream | 22468 | 46206998 ~ 46207984 (+) | True | XLOC_017627 |
| TCONS_00034957 | mRNA | downstream | 29023 | 46213553 ~ 46232859 (+) | False | XLOC_017628 |
| TCONS_00034958 | mRNA | downstream | 31901 | 46216431 ~ 46231298 (+) | True | XLOC_017628 |
| TCONS_00034947 | other | upstream | 142138 | 46039591 ~ 46041367 (+) | False | XLOC_017620 |
| TCONS_00034940 | other | upstream | 1248350 | 44935039 ~ 44935155 (+) | True | XLOC_017608 |
| TCONS_00034931 | other | upstream | 1984690 | 44198698 ~ 44198815 (+) | True | XLOC_017601 |
| TCONS_00034930 | other | upstream | 2043644 | 44139745 ~ 44139861 (+) | True | XLOC_017600 |
| TCONS_00034912 | other | upstream | 3173892 | 43006304 ~ 43009613 (+) | True | XLOC_017581 |
| TCONS_00034979 | other | downstream | 258050 | 46442580 ~ 46494784 (+) | False | XLOC_017646 |
| TCONS_00034980 | other | downstream | 272514 | 46457044 ~ 46494690 (+) | False | XLOC_017646 |
| TCONS_00034982 | other | downstream | 324015 | 46508545 ~ 46513858 (+) | False | XLOC_017646 |
| TCONS_00035004 | other | downstream | 920180 | 47104710 ~ 47104873 (+) | True | XLOC_017657 |
| TCONS_00035005 | other | downstream | 921564 | 47106094 ~ 47106257 (+) | True | XLOC_017658 |
