RNA id: TU757735



Basic Information


Item Value
RNA id TU757735
length 328
lncRNA type intronic
GC content 0.41
exon number 2
gene id G665557
representative True

Chromosome Information


Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 3087549 ~ 3088475 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence


gggtttagtgatgtggttctgtagggttttaatgatgtggttctgtagggttttaatgatgtggttctgtaggggttttaatgatgtggttctgtagggtttagtgatgtggttctgtagggttttaatgatgtggttctgtagggtttagtgatgtggttctgtaggggtttagtgatgtggttctgtaggggttttaatgatgtggttctgtagggttttaatgatgtggttctgtaggggttttaatgatgtggttctgtagggttttagtgatgtggttctgtagggttttagtgatgtggttctgtagggttttagtgatgtg

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU757732 lncRNA downstream 18327 3069018 ~ 3069222 (-) True G665554
TU757730 lncRNA downstream 21099 3066217 ~ 3066450 (-) True G665552
TU757712 lncRNA downstream 60728 3026547 ~ 3026821 (-) True G665536
TU757703 lncRNA downstream 67424 3018308 ~ 3020125 (-) True G665531
TU757690 lncRNA downstream 82742 3004500 ~ 3004807 (-) True G665523
TU757736 lncRNA upstream 1213 3089688 ~ 3090710 (-) True G665558
TU757743 lncRNA upstream 16125 3104600 ~ 3105533 (-) True G665561
TU757756 lncRNA upstream 40655 3129130 ~ 3130936 (-) False G665574
TU757757 lncRNA upstream 40655 3129130 ~ 3130936 (-) False G665574
TU757759 lncRNA upstream 40655 3129130 ~ 3130936 (-) True G665574
XM_036984571.1 mRNA downstream 130274 2947015 ~ 2957275 (-) True LOC110529255
XR_005053038.1 mRNA downstream 130848 2956624 ~ 2956701 (-) True LOC118965659
XM_036984555.1 mRNA downstream 809112 2233985 ~ 2278437 (-) True LOC110529239
XM_036984548.1 mRNA downstream 886642 2110060 ~ 2200907 (-) False LOC110531067
XM_036984577.1 mRNA upstream 625302 3713777 ~ 3823317 (-) False LOC118965483
XM_036984578.1 mRNA upstream 625302 3713777 ~ 3823317 (-) True LOC118965483
XM_036984580.1 mRNA upstream 791358 3879833 ~ 3959350 (-) False LOC110529264
XM_036984582.1 mRNA upstream 791358 3879833 ~ 3959350 (-) False LOC110529264
XM_036984583.1 mRNA upstream 791358 3879833 ~ 3959350 (-) True LOC110529264
TU756738 other downstream 736568 2291402 ~ 2350981 (-) True G664763
TU756703 other downstream 1093019 1993889 ~ 1994530 (-) True G664733
TU755950 other downstream 1588978 1480175 ~ 1498571 (-) True armc1l
TU755929 other downstream 1649108 1437760 ~ 1438441 (-) True G664089
TU754888 other downstream 2657291 428191 ~ 430258 (-) True G663235
TU757795 other upstream 148413 3236888 ~ 3240052 (-) True G665603
TU757859 other upstream 251581 3340056 ~ 3340960 (-) True G665655
TU757924 other upstream 328638 3417113 ~ 3418288 (-) True G665718
TU758017 other upstream 432315 3520790 ~ 3521623 (-) True G665797
TU758186 other upstream 579757 3668232 ~ 3670147 (-) True G665927

Expression Profile