RNA id: TU757815



Basic Information


Item Value
RNA id TU757815
length 265
lncRNA type inter_gene
GC content 0.43
exon number 1
gene id G665619
representative True

Chromosome Information


Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 3247953 ~ 3248217 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence


gcatagtggagtctgccactagcacagtcagtctaatcagctcagctatcaccattgagaccgtgtctgtgcctcgacctaggttgggcaaaaccaaacatggcggtgttcgccttagcaatctcactaggataaagacctccattcctgccattattgagagagattgtgatacctcacatctcaaaatagggctacttaatgttagatcccttacttcaaaggcaattatagtcaatgaactaatcactgatcataatcttga

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU757756 lncRNA downstream 117017 3129130 ~ 3130936 (-) False G665574
TU757757 lncRNA downstream 117017 3129130 ~ 3130936 (-) False G665574
TU757759 lncRNA downstream 117017 3129130 ~ 3130936 (-) True G665574
TU757743 lncRNA downstream 142420 3104600 ~ 3105533 (-) True G665561
TU757736 lncRNA downstream 157243 3089688 ~ 3090710 (-) True G665558
TU757820 lncRNA upstream 10182 3258399 ~ 3258982 (-) True G665623
TU757823 lncRNA upstream 70268 3318485 ~ 3323457 (-) False G665624
TU757822 lncRNA upstream 73303 3321520 ~ 3323457 (-) False G665624
TU757824 lncRNA upstream 73303 3321520 ~ 3323457 (-) True G665624
TU757862 lncRNA upstream 99071 3347288 ~ 3349656 (-) False G665658
XM_036984568.1 mRNA downstream 127509 3081212 ~ 3120444 (-) True ccm2
XM_036984569.1 mRNA downstream 144607 3081212 ~ 3103346 (-) False ccm2
XM_036984571.1 mRNA downstream 290678 2947015 ~ 2957275 (-) True LOC110529255
XR_005053038.1 mRNA downstream 291252 2956624 ~ 2956701 (-) True LOC118965659
XM_036984555.1 mRNA downstream 969516 2233985 ~ 2278437 (-) True LOC110529239
XM_036984577.1 mRNA upstream 465560 3713777 ~ 3823317 (-) False LOC118965483
XM_036984578.1 mRNA upstream 465560 3713777 ~ 3823317 (-) True LOC118965483
XM_036984580.1 mRNA upstream 631616 3879833 ~ 3959350 (-) False LOC110529264
XM_036984582.1 mRNA upstream 631616 3879833 ~ 3959350 (-) False LOC110529264
XM_036984583.1 mRNA upstream 631616 3879833 ~ 3959350 (-) True LOC110529264
TU757795 other downstream 7901 3236888 ~ 3240052 (-) True G665603
TU756738 other downstream 896972 2291402 ~ 2350981 (-) True G664763
TU756703 other downstream 1253423 1993889 ~ 1994530 (-) True G664733
TU755950 other downstream 1749382 1480175 ~ 1498571 (-) True armc1l
TU755929 other downstream 1809512 1437760 ~ 1438441 (-) True G664089
TU757859 other upstream 91839 3340056 ~ 3340960 (-) True G665655
TU757924 other upstream 168896 3417113 ~ 3418288 (-) True G665718
TU758017 other upstream 272573 3520790 ~ 3521623 (-) True G665797
TU758186 other upstream 420015 3668232 ~ 3670147 (-) True G665927
TU759716 other upstream 1240589 4488806 ~ 4490220 (-) True G667122

Expression Profile