Gene
RNA
| Item | Value |
|---|---|
| RNA id | TCONS_00038651 |
| length | 1062 |
| RNA type | mRNA |
| GC content | 0.43 |
| exon number | 9 |
| gene id | XLOC_019629 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_007132.7 |
| NCBI id | CM002905.2 |
| chromosome length | 45934066 |
| location | 26062452 ~ 26071773 (-) |
| genome version | GRCz11_2017_zebrafish_Genome |
| species | zebrafish (Danio rerio) |
| id | name | namespace |
|---|---|---|
| GO:0006897 | endocytosis | biological_process |
| GO:0090385 | phagosome-lysosome fusion | biological_process |
| GO:0003924 | GTPase activity | molecular_function |
| GO:0005525 | GTP binding | molecular_function |
| id | description |
|---|---|
| ZDB-GENE-091118-61 | Predicted to enable GTP binding activity and GTPase activity. Predicted to be involved in endocytosis and phagosome-lysosome fusion. Orthologous to human RAB34 (RAB34, member RAS oncogene family). |
| ensembl_id | ENSDART00000004740 |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TCONS_00038648 | lncRNA | downstream | 263166 | 25796338 ~ 25799633 (-) | True | XLOC_019627 |
| TCONS_00039646 | lncRNA | downstream | 313872 | 25747176 ~ 25748927 (-) | True | XLOC_019624 |
| TCONS_00038628 | lncRNA | downstream | 461190 | 25599088 ~ 25601609 (-) | True | XLOC_019616 |
| TCONS_00038626 | lncRNA | downstream | 465222 | 25595716 ~ 25597577 (-) | False | XLOC_019616 |
| TCONS_00038612 | lncRNA | downstream | 684788 | 25376752 ~ 25378011 (-) | True | XLOC_019609 |
| TCONS_00039647 | lncRNA | upstream | 180234 | 26251376 ~ 26255052 (-) | False | XLOC_019633 |
| TCONS_00039648 | lncRNA | upstream | 180234 | 26251376 ~ 26395229 (-) | False | XLOC_019633 |
| TCONS_00038658 | lncRNA | upstream | 180234 | 26251376 ~ 26395308 (-) | False | XLOC_019633 |
| TCONS_00039649 | lncRNA | upstream | 258338 | 26329480 ~ 26395308 (-) | False | XLOC_019633 |
| TCONS_00039650 | lncRNA | upstream | 284890 | 26356032 ~ 26395302 (-) | True | XLOC_019633 |
| TCONS_00038649 | mRNA | downstream | 34594 | 26021496 ~ 26028205 (-) | True | XLOC_019628 |
| TCONS_00038647 | mRNA | downstream | 260843 | 25795875 ~ 25801956 (-) | False | XLOC_019627 |
| TCONS_00038646 | mRNA | downstream | 288194 | 25773530 ~ 25774605 (-) | True | XLOC_019626 |
| TCONS_00038645 | mRNA | downstream | 306680 | 25754268 ~ 25756119 (-) | True | XLOC_019625 |
| TCONS_00038644 | mRNA | downstream | 313886 | 25747063 ~ 25748913 (-) | False | XLOC_019624 |
| TCONS_00038653 | mRNA | upstream | 9073 | 26080215 ~ 26089964 (-) | True | XLOC_019630 |
| TCONS_00038654 | mRNA | upstream | 26590 | 26097732 ~ 26114886 (-) | True | XLOC_019631 |
| TCONS_00038655 | mRNA | upstream | 81190 | 26152332 ~ 26250443 (-) | False | XLOC_019632 |
| TCONS_00038656 | mRNA | upstream | 81190 | 26152332 ~ 26250744 (-) | False | XLOC_019632 |
| TCONS_00038659 | mRNA | upstream | 330190 | 26401332 ~ 26406304 (-) | False | XLOC_019634 |
| TCONS_00038640 | other | downstream | 340007 | 25703078 ~ 25722792 (-) | False | XLOC_019622 |
| TCONS_00038634 | other | downstream | 437616 | 25620405 ~ 25625183 (-) | True | XLOC_019619 |
| TCONS_00038630 | other | downstream | 449602 | 25605533 ~ 25613197 (-) | False | XLOC_019617 |
| TCONS_00038618 | other | downstream | 599435 | 25452590 ~ 25463364 (-) | True | XLOC_019612 |
| TCONS_00038597 | other | downstream | 2315852 | 23552023 ~ 23746947 (-) | True | XLOC_019599 |
| TCONS_00038657 | other | upstream | 81700 | 26152842 ~ 26170837 (-) | True | XLOC_019632 |
| TCONS_00038671 | other | upstream | 630679 | 26701821 ~ 26701954 (-) | True | XLOC_019643 |
| TCONS_00038674 | other | upstream | 846786 | 26917928 ~ 26918903 (-) | True | XLOC_019646 |
| TCONS_00038689 | other | upstream | 1133857 | 27204999 ~ 27221304 (-) | False | XLOC_019652 |
| TCONS_00038698 | other | upstream | 1411007 | 27482149 ~ 27483038 (-) | False | XLOC_019657 |
