RNA id: TCONS_00038696


Basic Information

Item Value
RNA id TCONS_00038696
length 1671
RNA type mRNA
GC content 0.40
exon number 11
gene id XLOC_019656
representative False

Chromosome Information

Item Value
chromosome id NC_007132.7
NCBI id CM002905.2
chromosome length 45934066
location 27437867 ~ 27443995 (-)
genome version GRCz11_2017_zebrafish_Genome
species zebrafish
(Danio rerio)

Sequence

AAATGACCCCCAGACTGTTTGCTTCTGTGTTTTTGTGCCTCATCTGAAGTCTTGACCAGCATGGAGTGTGGGCAGCGGTTAAAGTGGTTAATACTTGCACTGATATGTCCTCTCATTGCAGGTGCTCCATCCAGAGATAGTTCATGTCCCGAAGAAAATCTGAACATTACAGGAGGGAGTTTTACTCTTTCTAATGGCTATTCAGATGGGAGTTATCTGACATACATTTGTCCGGATGGATATTACCCATCTATTCCAACACGTCGTTGTCAGTTTGGACTTTGGACCCCAAATACCAGCACCAGAAAAAAAGCTGAGTGCAAAAaaatcACATGTCCTACTCCTCGTGTTTTGGAGAACGGAGAGGTGGCTCCATATCAAGAGAGGTACTATATAAATGAGGTAACCACTTATTCGTGTAATCCTGATTATAAATTCCGAGGCTCGAAGGTCCGGGTTTGCCAGTCTAATGGGAAGTGGAATGGAAGCACGCCAATCTGTGAACGTGACTCTGATCACTGTCCTGATCCTGGCGTTCCCCCTGGTAGCAGTCGAACAGGCAGCACATTTAACATTGATGATGAAGTCACGTACCACTGTGATAGTCCATTGACCCTGATTGGTTCCAAAGTGCGTAAGTGTCAGGATGGTGGCCAGTGGTCAGGAACAGAGCCACAGTGCTACGCTGATTTCACATACGACACTGCAGCAGAAGTAGCTAAAGCTTTCGGCAATTCTCTGAAGACAATGCTCACAGTTCAACAAGAGTCTGAAGACGATCACCATGGGAAGAAAATTTATTTGAATAAGGGTGGAAAACTTGATATCTACATTGCTGTGGATGTGTCTGACAGCATAAATGATttgaaaaaagcaaaacaaattattaaaacgcTCCTAGAAAAGATAAGTTATTATGAGGTTTCTCCAAGCTATGAGATCCTGATGTTTGCTACAGATGTTTATCAGATAGTTAAGATGAGGGACTTCAAAACTGAGGAAGTTGCAGGAAGCCTATCTAAAGTTTTTGAGGATTTGGACAAATTTGATTTTGACAAAAAATTGGATCAAAAAAGCAGTAATATTGCCAAACTTTATCAGACCATTTTAGACAGCATGTCTAACGAGCAAATCAGGAATAAAGAAGACTTTCTTCAGACCAAACACGTTGTCATCGTGTTTACTGATGGCCAAGCTAACATGGGAGGGAATCCCAAACCTAAAGTGCACCTAATAAGGAATCTTGTCTTAAAAAATGATGCAAATCGAGAGAATAAACTTGATCTTTATGTATTTGGAGTTGGAAAGGATGTAAGGACAGAAGACCTGAATGGCTTAGTGTCAGAGAAGGAGAATGAAAGACATTTCTTTAAACTTCAAGACTTGGACGAGGTGCAGAAGACGTTTGACAGCTTGATGAATGATCAGTGAGTGGCGTGACCTTATGGAGGCCAGGCATGAGTACTGGAATGTTTTGTTCATCTTCTGTTCCTATTTTTAACATTAGTTGTGTCACATTGTAAACAAAAAGTGTTTATATATTACAAGATGTGTTTACAATGAATGACggtgaatataaaaatatttttctgcTTTGACTcaaatttttaaaactttttatcaTATATTCCTACAggtgattttaaaaataacaataacaacttgttaatt

Function

GO: NA

KEGG: NA

ZFIN:

id description
ZDB-GENE-990415-34 Predicted to enable serine-type endopeptidase activity. Predicted to act upstream of or within complement activation and proteolysis. Predicted to be located in extracellular region. Is expressed in liver.

Ensembl:

ensembl_id ENSDART00000003508

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TCONS_00038695 lncRNA downstream 24597 27407482 ~ 27413270 (-) True XLOC_019655
TCONS_00038687 lncRNA downstream 229242 27204901 ~ 27208625 (-) False XLOC_019652
TCONS_00039656 lncRNA downstream 246433 27188124 ~ 27191434 (-) True XLOC_019649
TCONS_00038678 lncRNA downstream 427078 27002609 ~ 27010789 (-) True XLOC_019647
TCONS_00039655 lncRNA downstream 612561 26820922 ~ 26825306 (-) True XLOC_019645
TCONS_00038704 lncRNA upstream 114495 27558490 ~ 27566738 (-) True XLOC_019658
TCONS_00038712 lncRNA upstream 701985 28145980 ~ 28234944 (-) True XLOC_019660
TCONS_00039657 lncRNA upstream 919479 28363474 ~ 28363814 (-) True XLOC_019663
TCONS_00039658 lncRNA upstream 958975 28402970 ~ 28411915 (-) True XLOC_019664
TCONS_00039245 lncRNA upstream 1049082 28493077 ~ 28500621 (-) False XLOC_019666
TCONS_00038694 mRNA downstream 24573 27407481 ~ 27413294 (-) False XLOC_019655
TCONS_00038693 mRNA downstream 74929 27356768 ~ 27362938 (-) True XLOC_019654
TCONS_00038692 mRNA downstream 99228 27327442 ~ 27338639 (-) True XLOC_019653
TCONS_00038691 mRNA downstream 186755 27230610 ~ 27251112 (-) True XLOC_019652
TCONS_00038690 mRNA downstream 216332 27205099 ~ 27221535 (-) False XLOC_019652
TCONS_00038702 mRNA upstream 38323 27482318 ~ 27507786 (-) False XLOC_019657
TCONS_00038701 mRNA upstream 38323 27482318 ~ 27507786 (-) False XLOC_019657
TCONS_00038700 mRNA upstream 38323 27482318 ~ 27507786 (-) False XLOC_019657
TCONS_00038699 mRNA upstream 38323 27482318 ~ 27507786 (-) False XLOC_019657
TCONS_00038705 mRNA upstream 131763 27575758 ~ 27619701 (-) False XLOC_019659
TCONS_00038689 other downstream 216563 27204999 ~ 27221304 (-) False XLOC_019652
TCONS_00038674 other downstream 518964 26917928 ~ 26918903 (-) True XLOC_019646
TCONS_00038671 other downstream 735913 26701821 ~ 26701954 (-) True XLOC_019643
TCONS_00038657 other downstream 1267030 26152842 ~ 26170837 (-) True XLOC_019632
TCONS_00038640 other downstream 1715075 25703078 ~ 25722792 (-) False XLOC_019622
TCONS_00038698 other upstream 38154 27482149 ~ 27483038 (-) False XLOC_019657
TCONS_00038703 other upstream 40096 27484091 ~ 27488961 (-) True XLOC_019657
TCONS_00038710 other upstream 502279 27946274 ~ 27946391 (-) True XLOC_019661
TCONS_00038711 other upstream 619211 28063206 ~ 28063322 (-) True XLOC_019662
TCONS_00038723 other upstream 1339832 28783827 ~ 28783944 (-) True XLOC_019671

Expression Profile

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