Gene
RNA
| Item | Value |
|---|---|
| RNA id | TCONS_00040068 |
| length | 1150 |
| RNA type | mRNA |
| GC content | 0.41 |
| exon number | 5 |
| gene id | XLOC_020103 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_007133.7 |
| NCBI id | CM002906.2 |
| chromosome length | 39133080 |
| location | 5858467 ~ 5876077 (+) |
| genome version | GRCz11_2017_zebrafish_Genome |
| species | zebrafish (Danio rerio) |
| id | name | namespace |
|---|---|---|
| GO:0016020 | membrane | cellular_component |
| GO:0016021 | integral component of membrane | cellular_component |
| id | description |
|---|---|
| ZDB-GENE-050208-727 | Predicted to be located in membrane. Predicted to be integral component of membrane. |
| ensembl_id | ENSDART00000139659 |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TCONS_00042027 | lncRNA | upstream | 43464 | 5806851 ~ 5825209 (+) | True | XLOC_020100 |
| TCONS_00041866 | lncRNA | upstream | 227990 | 5637885 ~ 5640683 (+) | True | XLOC_020095 |
| TCONS_00042026 | lncRNA | upstream | 571597 | 5296092 ~ 5297076 (+) | True | XLOC_020088 |
| TCONS_00042025 | lncRNA | upstream | 746117 | 5118378 ~ 5122556 (+) | False | XLOC_020083 |
| TCONS_00042028 | lncRNA | downstream | 32617 | 5908694 ~ 5923242 (+) | True | XLOC_020104 |
| TCONS_00042029 | lncRNA | downstream | 45891 | 5921968 ~ 5939401 (+) | True | XLOC_020105 |
| TCONS_00041867 | lncRNA | downstream | 289727 | 6165804 ~ 6166752 (+) | True | XLOC_020111 |
| TCONS_00042030 | lncRNA | downstream | 393369 | 6269446 ~ 6276183 (+) | True | XLOC_020114 |
| TCONS_00042031 | lncRNA | downstream | 507928 | 6384005 ~ 6391617 (+) | False | XLOC_020117 |
| TCONS_00040066 | mRNA | upstream | 11463 | 5851122 ~ 5857210 (+) | True | XLOC_020102 |
| TCONS_00040064 | mRNA | upstream | 112289 | 5752257 ~ 5756384 (+) | True | XLOC_020099 |
| TCONS_00040063 | mRNA | upstream | 129313 | 5727753 ~ 5739360 (+) | True | XLOC_020098 |
| TCONS_00040061 | mRNA | upstream | 168191 | 5687631 ~ 5700482 (+) | False | XLOC_020097 |
| TCONS_00040071 | mRNA | downstream | 83907 | 5959984 ~ 5966827 (+) | False | XLOC_020106 |
| TCONS_00040070 | mRNA | downstream | 83907 | 5959984 ~ 5966827 (+) | False | XLOC_020106 |
| TCONS_00040069 | mRNA | downstream | 83907 | 5959984 ~ 5966827 (+) | True | XLOC_020106 |
| TCONS_00040072 | mRNA | downstream | 95327 | 5971404 ~ 5977530 (+) | True | XLOC_020107 |
| TCONS_00040073 | mRNA | downstream | 208694 | 6084771 ~ 6085666 (+) | True | XLOC_020108 |
| TCONS_00040065 | other | upstream | 56219 | 5810877 ~ 5812454 (+) | True | XLOC_020101 |
| TCONS_00040051 | other | upstream | 561099 | 5307485 ~ 5307574 (+) | True | XLOC_020090 |
| TCONS_00040050 | other | upstream | 568617 | 5299951 ~ 5300056 (+) | True | XLOC_020089 |
| TCONS_00040049 | other | upstream | 575372 | 5293213 ~ 5293301 (+) | True | XLOC_020087 |
| TCONS_00040044 | other | upstream | 738649 | 5125898 ~ 5130024 (+) | True | XLOC_020084 |
| TCONS_00040079 | other | downstream | 414157 | 6290234 ~ 6290350 (+) | True | XLOC_020115 |
| TCONS_00040089 | other | downstream | 695770 | 6571847 ~ 6576940 (+) | True | XLOC_020123 |
| TCONS_00040103 | other | downstream | 1067326 | 6943403 ~ 6948506 (+) | False | XLOC_020139 |
| TCONS_00040108 | other | downstream | 1563450 | 7439527 ~ 7444022 (+) | False | XLOC_020142 |
| TCONS_00040109 | other | downstream | 1567238 | 7443315 ~ 7444045 (+) | False | XLOC_020142 |
