Gene
RNA
| Item | Value |
|---|---|
| RNA id | TCONS_00049495 |
| length | 1393 |
| RNA type | mRNA |
| GC content | 0.62 |
| exon number | 8 |
| gene id | XLOC_024948 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_007114.7 |
| NCBI id | CM002887.2 |
| chromosome length | 62628489 |
| location | 1209006 ~ 1218227 (+) |
| genome version | GRCz11_2017_zebrafish_Genome |
| species | zebrafish (Danio rerio) |
| id | name | namespace |
|---|---|---|
| GO:0003676 | nucleic acid binding | molecular_function |
| GO:0003723 | RNA binding | molecular_function |
| id | description |
|---|---|
| ko03019 | Messenger RNA biogenesis |
| id | description |
|---|---|
| ZDB-GENE-120201-2 | Predicted to enable mRNA binding activity. Predicted to be involved in poly(A)+ mRNA export from nucleus. Predicted to be active in nuclear speck. Orthologous to human POLDIP3 (DNA polymerase delta interacting protein 3). |
| ensembl_id | ENSDART00000171287 |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TCONS_00049493 | lncRNA | upstream | 19900 | 1187244 ~ 1191342 (+) | True | XLOC_024947 |
| TCONS_00049488 | lncRNA | upstream | 57193 | 1150386 ~ 1154049 (+) | True | XLOC_024944 |
| TCONS_00052525 | lncRNA | upstream | 75502 | 1132938 ~ 1135740 (+) | False | XLOC_024943 |
| TCONS_00052524 | lncRNA | upstream | 75502 | 1132938 ~ 1135740 (+) | True | XLOC_024943 |
| TCONS_00052523 | lncRNA | upstream | 104929 | 1096804 ~ 1106313 (+) | False | XLOC_024941 |
| TCONS_00052526 | lncRNA | downstream | 16846 | 1235024 ~ 1236717 (+) | False | XLOC_024951 |
| TCONS_00052527 | lncRNA | downstream | 17227 | 1235405 ~ 1236717 (+) | True | XLOC_024951 |
| TCONS_00049499 | lncRNA | downstream | 42182 | 1260360 ~ 1268825 (+) | True | XLOC_024952 |
| TCONS_00052303 | lncRNA | downstream | 336721 | 1554899 ~ 1563730 (+) | False | XLOC_024954 |
| TCONS_00052528 | lncRNA | downstream | 354672 | 1572850 ~ 1577061 (+) | False | XLOC_024955 |
| TCONS_00049492 | mRNA | upstream | 25142 | 1182315 ~ 1186100 (+) | True | XLOC_024946 |
| TCONS_00049490 | mRNA | upstream | 30722 | 1167031 ~ 1180520 (+) | False | XLOC_024945 |
| TCONS_00049489 | mRNA | upstream | 30772 | 1167026 ~ 1180470 (+) | False | XLOC_024945 |
| TCONS_00049491 | mRNA | upstream | 31093 | 1179601 ~ 1180149 (+) | True | XLOC_024945 |
| TCONS_00049487 | mRNA | upstream | 55209 | 1150348 ~ 1156033 (+) | False | XLOC_024944 |
| TCONS_00049497 | mRNA | downstream | 1166 | 1219344 ~ 1222249 (+) | True | XLOC_024949 |
| TCONS_00049498 | mRNA | downstream | 5646 | 1223824 ~ 1228130 (+) | True | XLOC_024950 |
| TCONS_00049500 | mRNA | downstream | 273996 | 1492174 ~ 1501255 (+) | True | XLOC_024953 |
| TCONS_00049508 | mRNA | downstream | 419180 | 1637358 ~ 1639983 (+) | True | XLOC_024959 |
| TCONS_00049509 | mRNA | downstream | 471042 | 1689220 ~ 1704409 (+) | False | XLOC_024960 |
| TCONS_00049471 | other | upstream | 356612 | 842733 ~ 854630 (+) | True | XLOC_024931 |
| TCONS_00049457 | other | upstream | 788504 | 420342 ~ 422738 (+) | True | XLOC_024918 |
| TCONS_00049501 | other | downstream | 336124 | 1554302 ~ 1559477 (+) | False | XLOC_024954 |
| TCONS_00049502 | other | downstream | 338675 | 1556853 ~ 1682090 (+) | True | XLOC_024954 |
| TCONS_00049503 | other | downstream | 354672 | 1572850 ~ 1576295 (+) | False | XLOC_024955 |
| TCONS_00049504 | other | downstream | 358575 | 1576753 ~ 1586425 (+) | False | XLOC_024955 |
| TCONS_00049505 | other | downstream | 367876 | 1586054 ~ 1588601 (+) | True | XLOC_024955 |
