Gene
RNA
| Item | Value |
|---|---|
| RNA id | TCONS_00050611 |
| length | 2906 |
| RNA type | mRNA |
| GC content | 0.47 |
| exon number | 13 |
| gene id | XLOC_025745 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_007114.7 |
| NCBI id | CM002887.2 |
| chromosome length | 62628489 |
| location | 52545014 ~ 52603683 (+) |
| genome version | GRCz11_2017_zebrafish_Genome |
| species | zebrafish (Danio rerio) |
| id | name | namespace |
|---|---|---|
| GO:0032868 | response to insulin | biological_process |
| GO:0032049 | cardiolipin biosynthetic process | biological_process |
| GO:0006646 | phosphatidylethanolamine biosynthetic process | biological_process |
| GO:0006654 | phosphatidic acid biosynthetic process | biological_process |
| GO:0006655 | phosphatidylglycerol biosynthetic process | biological_process |
| GO:0006656 | phosphatidylcholine biosynthetic process | biological_process |
| GO:0006659 | phosphatidylserine biosynthetic process | biological_process |
| GO:0071072 | negative regulation of phospholipid biosynthetic process | biological_process |
| GO:0006661 | phosphatidylinositol biosynthetic process | biological_process |
| GO:0071902 | positive regulation of protein serine/threonine kinase activity | biological_process |
| GO:0033211 | adiponectin-activated signaling pathway | biological_process |
| GO:0044539 | long-chain fatty acid import into cell | biological_process |
| GO:0009409 | response to cold | biological_process |
| GO:0001579 | medium-chain fatty acid transport | biological_process |
| GO:0031652 | positive regulation of heat generation | biological_process |
| GO:0005743 | mitochondrial inner membrane | cellular_component |
| GO:0005886 | plasma membrane | cellular_component |
| GO:0016021 | integral component of membrane | cellular_component |
| GO:0005739 | mitochondrion | cellular_component |
| GO:0004467 | long-chain fatty acid-CoA ligase activity | molecular_function |
| GO:0015245 | fatty acid transmembrane transporter activity | molecular_function |
| GO:0031957 | very long-chain fatty acid-CoA ligase activity | molecular_function |
| GO:0005324 | long-chain fatty acid transporter activity | molecular_function |
| GO:0003824 | catalytic activity | molecular_function |
| id | description |
|---|---|
| ZDB-GENE-050320-112 | Predicted to enable fatty acid transmembrane transporter activity; long-chain fatty acid transporter activity; and long-chain fatty acid-CoA ligase activity. Predicted to be involved in several processes, including glycerophospholipid biosynthetic process; lipid transport; and regulation of phosphate metabolic process. Predicted to be integral component of membrane. Predicted to be active in plasma membrane. Predicted to colocalize with mitochondrial inner membrane. Orthologous to human SLC27A1 (solute carrier family 27 member 1). |
| ensembl_id | ENSDART00000018908 |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TCONS_00052379 | lncRNA | upstream | 152809 | 52390252 ~ 52392205 (+) | True | XLOC_025739 |
| TCONS_00052798 | lncRNA | upstream | 155975 | 52377578 ~ 52389039 (+) | True | XLOC_025738 |
| TCONS_00050604 | lncRNA | upstream | 165542 | 52367302 ~ 52379472 (+) | True | XLOC_025737 |
| TCONS_00052797 | lncRNA | upstream | 280868 | 52224103 ~ 52264146 (+) | False | XLOC_025735 |
| TCONS_00052380 | lncRNA | downstream | 202589 | 52806272 ~ 52809710 (+) | False | XLOC_025750 |
| TCONS_00052799 | lncRNA | downstream | 923282 | 53526965 ~ 53652401 (+) | False | XLOC_025761 |
| TCONS_00052381 | lncRNA | downstream | 1002483 | 53606166 ~ 53632347 (+) | False | XLOC_025761 |
| TCONS_00052382 | lncRNA | downstream | 1028435 | 53632118 ~ 53649626 (+) | True | XLOC_025761 |
| TCONS_00052383 | lncRNA | downstream | 1507706 | 54111389 ~ 54111972 (+) | True | XLOC_025765 |
| TCONS_00050610 | mRNA | upstream | 5351 | 52528606 ~ 52539663 (+) | True | XLOC_025744 |
| TCONS_00050609 | mRNA | upstream | 48249 | 52487695 ~ 52496765 (+) | True | XLOC_025743 |
| TCONS_00050608 | mRNA | upstream | 54963 | 52475058 ~ 52490051 (+) | False | XLOC_025743 |
| TCONS_00050607 | mRNA | upstream | 70244 | 52473670 ~ 52474770 (+) | True | XLOC_025742 |
| TCONS_00050606 | mRNA | upstream | 73253 | 52467879 ~ 52471761 (+) | True | XLOC_025741 |
| TCONS_00050614 | mRNA | downstream | 80873 | 52684556 ~ 52700610 (+) | True | XLOC_025747 |
| TCONS_00050615 | mRNA | downstream | 99017 | 52702700 ~ 52732034 (+) | True | XLOC_025748 |
| TCONS_00050616 | mRNA | downstream | 133882 | 52737565 ~ 52801302 (+) | False | XLOC_025749 |
| TCONS_00050617 | mRNA | downstream | 149733 | 52753416 ~ 52801106 (+) | True | XLOC_025749 |
| TCONS_00050618 | mRNA | downstream | 202664 | 52806347 ~ 52883424 (+) | False | XLOC_025750 |
| TCONS_00050578 | other | upstream | 2469824 | 50069595 ~ 50075190 (+) | False | XLOC_025717 |
| TCONS_00050573 | other | upstream | 3412537 | 49132341 ~ 49132477 (+) | True | XLOC_025709 |
| TCONS_00050561 | other | upstream | 5084411 | 47460488 ~ 47460603 (+) | True | XLOC_025690 |
| TCONS_00050528 | other | upstream | 6909828 | 45635077 ~ 45635186 (+) | True | XLOC_025668 |
| TCONS_00050515 | other | upstream | 7656861 | 44888037 ~ 44888153 (+) | True | XLOC_025662 |
| TCONS_00050613 | other | downstream | 16375 | 52620058 ~ 52620175 (+) | True | XLOC_025746 |
| TCONS_00050620 | other | downstream | 225229 | 52828912 ~ 52829006 (+) | True | XLOC_025751 |
| TCONS_00050635 | other | downstream | 1463840 | 54067523 ~ 54067639 (+) | True | XLOC_025764 |
| TCONS_00050662 | other | downstream | 2695360 | 55299043 ~ 55299158 (+) | True | XLOC_025787 |
| TCONS_00050664 | other | downstream | 2879830 | 55483513 ~ 55483647 (+) | True | XLOC_025789 |
| species | RNA id | representative | length | rna type | GC content | exon number | chromosome id | location |
|---|---|---|---|---|---|---|---|---|
| grasscarp (Ctenopharyngodon idella) | CI01000113_01554726_01565897.mRNA | True | 2380 | mRNA | 0.49 | 11 | CI01000113 | 1554144 ~ 1565897 (-) |
