RNA id: TU2014325


Basic Information

Item Value
RNA id TU2014325
length 226
lncRNA type inter_gene
GC content 0.46
exon number 1
gene id G1759069
representative True

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 60522861 ~ 60523086 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence

ggaagaagagagaagatGACGGGAGGCAAAAAGGACAGTGCTGGAGGTTTTTAAAAAAGGACTGAAAGGCTGGCAAAggacagagtgaaagagaagaTGAGAGAATAAGAAGAACAGGGAGGCGAGAGAAcacgaggaggagggaggatagagactgATCGTTTATGACAAGCTGTTGTTGACATGACTGAGACAGCAGACTATGAGAAGTGATGGAAAgaatgag

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU2014320 lncRNA upstream 17833 60504631 ~ 60505028 (+) True G1759064
TU2014298 lncRNA upstream 39242 60476202 ~ 60483619 (+) True G1759049
TU2014299 lncRNA upstream 40362 60473832 ~ 60482499 (+) True G1759050
TU2014300 lncRNA upstream 50475 60470646 ~ 60472386 (+) True G1759051
TU2014250 lncRNA upstream 93818 60400018 ~ 60429043 (+) True G1759007
TU2014334 lncRNA downstream 12933 60536019 ~ 60536219 (+) True G1759078
TU2014369 lncRNA downstream 24571 60547657 ~ 60548052 (+) True G1759111
TU2014382 lncRNA downstream 47248 60570334 ~ 60570665 (+) True G1759124
TU2014383 lncRNA downstream 47965 60571051 ~ 60571457 (+) True G1759125
TU2014385 lncRNA downstream 67435 60590521 ~ 60590822 (+) True G1759127
XR_005038766.1 mRNA upstream 203151 60319603 ~ 60319710 (+) True LOC118943030
XM_036956529.1 mRNA upstream 214956 60284625 ~ 60307905 (+) True LOC118942814
XM_036958311.1 mRNA upstream 250053 60257181 ~ 60272808 (+) False LOC110500950
XM_036958312.1 mRNA upstream 250053 60257181 ~ 60272808 (+) True LOC110500950
XM_036958313.1 mRNA upstream 251174 60257181 ~ 60271687 (+) False LOC110500950
XM_036958319.1 mRNA downstream 90304 60613390 ~ 60629257 (+) True LOC110500797
XM_036958320.1 mRNA downstream 109326 60632412 ~ 60654106 (+) False LOC110500798
XM_036958321.1 mRNA downstream 109326 60632412 ~ 60654106 (+) False LOC110500798
XM_036958322.1 mRNA downstream 109326 60632412 ~ 60654106 (+) False LOC110500798
XM_036958323.1 mRNA downstream 109326 60632412 ~ 60654106 (+) False LOC110500798
TU2013946 other upstream 163510 60358830 ~ 60359351 (+) True G1758786
TU2013992 other upstream 169827 60351646 ~ 60353034 (+) False G1758818
TU2013967 other upstream 196241 60322215 ~ 60326620 (+) False G1758801
TU2014439 other downstream 199072 60722158 ~ 60722472 (+) True G1759168
TU2014559 other downstream 287116 60810202 ~ 60810620 (+) True G1759267
TU2016357 other downstream 2211965 62735051 ~ 62741819 (+) True G1760504
TU2016469 other downstream 2288689 62811775 ~ 62814241 (+) True G1760587
TU2016581 other downstream 2350595 62873681 ~ 62889038 (+) True LOC110500953

Expression Profile