RNA id: TU2066670



Basic Information


Item Value
RNA id TU2066670
length 430
RNA type TUCP
GC content 0.53
exon number 1
gene id G1806393
representative True

Chromosome Information


Item Value
chromosome id NC_048586.1
NCBI id CM023240.2
chromosome length 52474311
location 36935658 ~ 36936087 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence


ttacaccgaggcctgtactctggagcggggtcGATTTGGAGttggtccgtcatggtctggggcggtgtgtcacagcatcatcggactgagcttgttgtcattgcaggcaatctcaaagccatcctcctccctcatatggtatccttcctgcaggctcatcctgacatgatcctccagcatgacaataccaccagccatactgctcattctgtgtgtgatttcttgcaagacaggaatgtcaatgttctgccatggccagcgaagagcctggatctcaatcccattgagcacatctgggacctgttggatcagagggtgagggctagggccaatccccccagaaatgtccgggaacttgcaggtgccttggtggaagagtggggtaacatctcacagcaagaactagcaaatctggtgcagtccatgagga

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU2066664 lncRNA downstream 11815 36923479 ~ 36923843 (-) True G1806387
TU2066663 lncRNA downstream 12604 36922605 ~ 36923054 (-) True G1806386
TU2066635 lncRNA downstream 18448 36914343 ~ 36917210 (-) True G1806358
TU2066616 lncRNA downstream 77492 36838824 ~ 36858166 (-) True G1806343
TU2066631 lncRNA downstream 80409 36854624 ~ 36855249 (-) True G1806356
TU2066672 lncRNA upstream 3314 36939401 ~ 36939670 (-) True G1806395
TU2066678 lncRNA upstream 8778 36944865 ~ 36945458 (-) True G1806401
TU2066682 lncRNA upstream 26574 36962661 ~ 36972940 (-) True G1806403
TU2066797 lncRNA upstream 215569 37151656 ~ 37151862 (-) True G1806511
TU2066827 lncRNA upstream 254968 37191055 ~ 37192056 (-) True G1806535
XM_036959216.1 mRNA downstream 98075 36552698 ~ 36837583 (-) False LOC110501806
XM_036959217.1 mRNA downstream 98075 36552698 ~ 36837583 (-) False LOC110501806
XM_036959218.1 mRNA downstream 98075 36552698 ~ 36837583 (-) False LOC110501806
XM_036959219.1 mRNA downstream 98075 36552698 ~ 36837583 (-) False LOC110501806
XM_036959220.1 mRNA downstream 98075 36552698 ~ 36837583 (-) False LOC110501806
XM_036959226.1 mRNA upstream 44009 36980096 ~ 37098305 (-) False LOC110501809
XM_036959224.1 mRNA upstream 44009 36980096 ~ 37099621 (-) True LOC110501809
XM_021579645.2 mRNA upstream 169398 37105485 ~ 37117837 (-) True hacd2
XM_021579653.2 mRNA upstream 422057 37358144 ~ 37390316 (-) True LOC110501816
XM_021579657.2 mRNA upstream 462983 37399070 ~ 37411510 (-) True LOC110501817
TU2066409 other downstream 356947 36577748 ~ 36578711 (-) True LOC110501806
TU2066167 other downstream 875890 36057844 ~ 36059768 (-) True G1805927
TU2064375 other downstream 1715959 35207463 ~ 35219699 (-) True LOC110502094
TU2064031 other downstream 1808825 35126479 ~ 35126833 (-) True G1803964
TU2063359 other downstream 2395485 34518506 ~ 34540173 (-) True bard1
TU2066735 other upstream 107474 37043561 ~ 37112474 (-) True G1806449
TU2067385 other upstream 823884 37759971 ~ 37760248 (-) True G1807020
TU2068246 other upstream 1257335 38193422 ~ 38195096 (-) True G1807750
TU2068217 other upstream 1272703 38208790 ~ 38213187 (-) False G1807731
TU2068420 other upstream 1639779 38575866 ~ 38612287 (-) True LOC110502145

Expression Profile