Gene
RNA
| Item | Value |
|---|---|
| RNA id | TCONS_00051782 |
| length | 713 |
| RNA type | processed_transcript |
| GC content | 0.43 |
| exon number | 2 |
| gene id | XLOC_026581 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_007114.7 |
| NCBI id | CM002887.2 |
| chromosome length | 62628489 |
| location | 34652144 ~ 34656745 (-) |
| genome version | GRCz11_2017_zebrafish_Genome |
| species | zebrafish (Danio rerio) |
| id | name | namespace |
|---|---|---|
| GO:0030902 | hindbrain development | biological_process |
| GO:0046872 | metal ion binding | molecular_function |
| GO:0003676 | nucleic acid binding | molecular_function |
| GO:0008270 | zinc ion binding | molecular_function |
| id | description |
|---|---|
| ZDB-GENE-030828-6 | Predicted to enable nucleic acid binding activity and zinc ion binding activity. Acts upstream of or within hindbrain development. Is expressed in several structures, including margin; mesoderm; neural tube; neuroectoderm; and notochord. |
| ensembl_id | ENSDART00000151062 |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TCONS_00052476 | lncRNA | downstream | 10999 | 34641048 ~ 34641973 (-) | True | XLOC_026580 |
| TCONS_00051776 | lncRNA | downstream | 59916 | 34591917 ~ 34593056 (-) | True | XLOC_026576 |
| TCONS_00051773 | lncRNA | downstream | 106566 | 34525942 ~ 34546406 (-) | False | XLOC_026575 |
| TCONS_00051771 | lncRNA | downstream | 175609 | 34470154 ~ 34477363 (-) | False | XLOC_026575 |
| TCONS_00051763 | lncRNA | downstream | 472521 | 34179807 ~ 34180451 (-) | True | XLOC_026573 |
| TCONS_00051786 | lncRNA | upstream | 46216 | 34701214 ~ 34706737 (-) | False | XLOC_026582 |
| TCONS_00051790 | lncRNA | upstream | 112543 | 34767541 ~ 34778787 (-) | True | XLOC_026583 |
| TCONS_00053067 | lncRNA | upstream | 147001 | 34801999 ~ 34804718 (-) | False | XLOC_026584 |
| TCONS_00051793 | lncRNA | upstream | 147001 | 34801999 ~ 34806079 (-) | False | XLOC_026584 |
| TCONS_00053068 | lncRNA | upstream | 292404 | 34947402 ~ 34948061 (-) | False | XLOC_026585 |
| TCONS_00051779 | mRNA | downstream | 28227 | 34623560 ~ 34624745 (-) | True | XLOC_026579 |
| TCONS_00051778 | mRNA | downstream | 39871 | 34601852 ~ 34613101 (-) | True | XLOC_026578 |
| TCONS_00051777 | mRNA | downstream | 53310 | 34597741 ~ 34599662 (-) | True | XLOC_026577 |
| TCONS_00051775 | mRNA | downstream | 59333 | 34587988 ~ 34593639 (-) | False | XLOC_026576 |
| TCONS_00051774 | mRNA | downstream | 66569 | 34525991 ~ 34586403 (-) | True | XLOC_026575 |
| TCONS_00051783 | mRNA | upstream | 33024 | 34688022 ~ 34717882 (-) | False | XLOC_026582 |
| TCONS_00051784 | mRNA | upstream | 42280 | 34697278 ~ 34753605 (-) | False | XLOC_026582 |
| TCONS_00051785 | mRNA | upstream | 42823 | 34697821 ~ 34724879 (-) | False | XLOC_026582 |
| TCONS_00051788 | mRNA | upstream | 111991 | 34766989 ~ 34801041 (-) | False | XLOC_026583 |
| TCONS_00051791 | mRNA | upstream | 146148 | 34801146 ~ 34816979 (-) | False | XLOC_026584 |
| TCONS_00051772 | other | downstream | 106573 | 34525942 ~ 34546399 (-) | False | XLOC_026575 |
| TCONS_00051752 | other | downstream | 549607 | 34102957 ~ 34103365 (-) | True | XLOC_026563 |
| TCONS_00051740 | other | downstream | 566489 | 34086041 ~ 34086483 (-) | True | XLOC_026558 |
| TCONS_00051725 | other | downstream | 588036 | 34063955 ~ 34064936 (-) | True | XLOC_026547 |
| TCONS_00051722 | other | downstream | 594255 | 34058679 ~ 34058717 (-) | True | XLOC_026544 |
| TCONS_00051787 | other | upstream | 88581 | 34743579 ~ 34753541 (-) | True | XLOC_026582 |
| TCONS_00051789 | other | upstream | 112543 | 34767541 ~ 34775954 (-) | False | XLOC_026583 |
| TCONS_00051794 | other | upstream | 150841 | 34805839 ~ 34813969 (-) | True | XLOC_026584 |
| TCONS_00051795 | other | upstream | 292640 | 34947638 ~ 34948034 (-) | True | XLOC_026585 |
| TCONS_00051816 | other | upstream | 1579209 | 36234207 ~ 36239041 (-) | False | XLOC_026597 |
