Gene
RNA
| Item | Value |
|---|---|
| RNA id | TCONS_00051774 |
| length | 970 |
| RNA type | mRNA |
| GC content | 0.52 |
| exon number | 3 |
| gene id | XLOC_026575 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_007114.7 |
| NCBI id | CM002887.2 |
| chromosome length | 62628489 |
| location | 34452336 ~ 34586403 (-) |
| genome version | GRCz11_2017_zebrafish_Genome |
| species | zebrafish (Danio rerio) |
| id | name | namespace |
|---|---|---|
| GO:0034613 | cellular protein localization | biological_process |
| GO:0061640 | cytoskeleton-dependent cytokinesis | biological_process |
| GO:0032153 | cell division site | cellular_component |
| GO:0015630 | microtubule cytoskeleton | cellular_component |
| GO:0031105 | septin complex | cellular_component |
| GO:0005940 | septin ring | cellular_component |
| GO:0060090 | molecular adaptor activity | molecular_function |
| GO:0003924 | GTPase activity | molecular_function |
| GO:0005525 | GTP binding | molecular_function |
| GO:0000166 | nucleotide binding | molecular_function |
| id | description |
|---|---|
| ZDB-GENE-030131-9187 | Predicted to enable GTPase activity and molecular adaptor activity. Predicted to be involved in cellular protein localization and cytoskeleton-dependent cytokinesis. Predicted to be part of septin complex. Predicted to be active in cell division site; microtubule cytoskeleton; and septin ring. Is expressed in several structures, including anterior axial hypoblast; blood vessel; endoderm; mesoderm; and musculature system. Human ortholog(s) of this gene implicated in brachial plexus neuritis. Orthologous to human SEPTIN9 (septin 9). |
| ensembl_id | ENSDART00000151515 |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TCONS_00051771 | lncRNA | downstream | 48628 | 34470154 ~ 34477363 (-) | False | XLOC_026575 |
| TCONS_00051763 | lncRNA | downstream | 345540 | 34179807 ~ 34180451 (-) | True | XLOC_026573 |
| TCONS_00051762 | lncRNA | downstream | 345559 | 34179807 ~ 34180432 (-) | False | XLOC_026573 |
| TCONS_00053066 | lncRNA | downstream | 384810 | 34139637 ~ 34141181 (-) | True | XLOC_026572 |
| TCONS_00051677 | lncRNA | downstream | 587170 | 33936453 ~ 33938821 (-) | True | XLOC_026512 |
| TCONS_00051776 | lncRNA | upstream | 5514 | 34591917 ~ 34593056 (-) | True | XLOC_026576 |
| TCONS_00052476 | lncRNA | upstream | 54645 | 34641048 ~ 34641973 (-) | True | XLOC_026580 |
| TCONS_00052477 | lncRNA | upstream | 67184 | 34653587 ~ 34655108 (-) | True | XLOC_026581 |
| TCONS_00051786 | lncRNA | upstream | 114811 | 34701214 ~ 34706737 (-) | False | XLOC_026582 |
| TCONS_00051790 | lncRNA | upstream | 181138 | 34767541 ~ 34778787 (-) | True | XLOC_026583 |
| TCONS_00051764 | mRNA | downstream | 188022 | 34258755 ~ 34337969 (-) | False | XLOC_026574 |
| TCONS_00051767 | mRNA | downstream | 229630 | 34265049 ~ 34296361 (-) | False | XLOC_026574 |
| TCONS_00051766 | mRNA | downstream | 229630 | 34265049 ~ 34296361 (-) | True | XLOC_026574 |
| TCONS_00051765 | mRNA | downstream | 246882 | 34265049 ~ 34279109 (-) | False | XLOC_026574 |
| TCONS_00051760 | mRNA | downstream | 345527 | 34174004 ~ 34180464 (-) | False | XLOC_026573 |
| TCONS_00051775 | mRNA | upstream | 1585 | 34587988 ~ 34593639 (-) | False | XLOC_026576 |
| TCONS_00051777 | mRNA | upstream | 11338 | 34597741 ~ 34599662 (-) | True | XLOC_026577 |
| TCONS_00051778 | mRNA | upstream | 15449 | 34601852 ~ 34613101 (-) | True | XLOC_026578 |
| TCONS_00051779 | mRNA | upstream | 37157 | 34623560 ~ 34624745 (-) | True | XLOC_026579 |
| TCONS_00051780 | mRNA | upstream | 65741 | 34652144 ~ 34656745 (-) | False | XLOC_026581 |
| TCONS_00051752 | other | downstream | 422626 | 34102957 ~ 34103365 (-) | True | XLOC_026563 |
| TCONS_00051740 | other | downstream | 439508 | 34086041 ~ 34086483 (-) | True | XLOC_026558 |
| TCONS_00051725 | other | downstream | 461055 | 34063955 ~ 34064936 (-) | True | XLOC_026547 |
| TCONS_00051722 | other | downstream | 467274 | 34058679 ~ 34058717 (-) | True | XLOC_026544 |
| TCONS_00051716 | other | downstream | 477338 | 34048205 ~ 34048653 (-) | True | XLOC_026539 |
| TCONS_00051781 | other | upstream | 65907 | 34652310 ~ 34656737 (-) | False | XLOC_026581 |
| TCONS_00051782 | other | upstream | 66569 | 34652972 ~ 34654998 (-) | False | XLOC_026581 |
| TCONS_00051787 | other | upstream | 157176 | 34743579 ~ 34753541 (-) | True | XLOC_026582 |
| TCONS_00051789 | other | upstream | 181138 | 34767541 ~ 34775954 (-) | False | XLOC_026583 |
| TCONS_00051794 | other | upstream | 219436 | 34805839 ~ 34813969 (-) | True | XLOC_026584 |
