RNA id: TU2381405



Basic Information


Item Value
RNA id TU2381405
length 204
lncRNA type intronic
GC content 0.49
exon number 2
gene id G2082604
representative False

Chromosome Information


Item Value
chromosome id NC_048591.1
NCBI id CM023245.2
chromosome length 51556237
location 40805473 ~ 40805922 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence


ctctctctctctctctctctctctctgtctctctctgtctgtctctctctctctctctctctctctctctgtctctctctctctctctctctctctctctctccttctctgtctgtctgtctctctctctctctctctttctctctctctctctctgtctctctctctctctctgtctctctctctctttctctctctctgtgt

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU2381352 lncRNA upstream 108939 40695608 ~ 40696534 (+) True G2082554
TU2381291 lncRNA upstream 132946 40671690 ~ 40672527 (+) False G2082509
TU2381287 lncRNA upstream 132946 40672072 ~ 40672527 (+) True G2082509
TU2381294 lncRNA upstream 133561 40671690 ~ 40671912 (+) False G2082509
TU2381316 lncRNA upstream 165082 40636576 ~ 40640391 (+) True G2082525
TU2381411 lncRNA downstream 6173 40812095 ~ 40812351 (+) True G2082609
TU2381753 lncRNA downstream 36320 40842242 ~ 40842451 (+) False LOC110508042
TU2381754 lncRNA downstream 36906 40842828 ~ 40843107 (+) True G2082888
TU2381758 lncRNA downstream 39550 40845472 ~ 40846039 (+) True LOC110508042
TU2381767 lncRNA downstream 45877 40851799 ~ 40931560 (+) True G2082897
XM_036965107.1 mRNA upstream 135394 40661246 ~ 40670079 (+) False LOC110508037
XM_021588488.2 mRNA downstream 34784 40840706 ~ 40847141 (+) False LOC110508042
LOC110507226 mRNA downstream 51208 40857130 ~ 40878102 (+) False LOC110507226
LOC118944684 mRNA downstream 98592 40904514 ~ 40907313 (+) True LOC118944684
XM_021588491.2 mRNA downstream 186156 40992078 ~ 40996568 (+) True LOC110508044
XM_021587121.2 mRNA downstream 357321 41163243 ~ 41168484 (+) True LOC110507231
TU2380828 other upstream 847722 39957215 ~ 39957751 (+) True G2082162
TU2380578 other upstream 871638 39931874 ~ 39933835 (+) True G2081949
TU2380477 other upstream 892395 39895667 ~ 39913078 (+) False LOC110507223
TU2380510 other upstream 968090 39827658 ~ 39837383 (+) True G2081884
TU2378436 other upstream 2860322 37944932 ~ 37945151 (+) True G2080014
TU2381755 other downstream 37592 40843514 ~ 40844780 (+) False LOC110508042
TU2381759 other downstream 38907 40844829 ~ 40846039 (+) False LOC110508042
TU2381889 other downstream 175448 40981370 ~ 40984854 (+) True G2083005
TU2382143 other downstream 406282 41212204 ~ 41212772 (+) True G2083239
TU2382447 other downstream 700437 41506359 ~ 41507173 (+) True LOC110507232

Expression Profile