Gene
RNA
| Item | Value |
|---|---|
| RNA id | TCONS_00005266 |
| length | 1097 |
| RNA type | mRNA |
| GC content | 0.44 |
| exon number | 9 |
| gene id | XLOC_002839 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_007121.7 |
| NCBI id | CM002894.2 |
| chromosome length | 45420867 |
| location | 29087810 ~ 29101849 (-) |
| genome version | GRCz11_2017_zebrafish_Genome |
| species | zebrafish (Danio rerio) |
| id | name | namespace |
|---|---|---|
| GO:0005615 | extracellular space | cellular_component |
| GO:0009986 | cell surface | cellular_component |
| GO:0016020 | membrane | cellular_component |
| GO:0016021 | integral component of membrane | cellular_component |
| GO:0005201 | extracellular matrix structural constituent | molecular_function |
| id | description |
|---|---|
| ZDB-GENE-110411-160 | Predicted to be an extracellular matrix structural constituent. Predicted to be located in membrane. Predicted to be integral component of membrane. Predicted to be active in cell surface and extracellular space. |
| ensembl_id | ENSDART00000149674 |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TCONS_00006074 | lncRNA | downstream | 629251 | 28460213 ~ 28465026 (-) | True | XLOC_002834 |
| TCONS_00005770 | lncRNA | downstream | 676098 | 28417651 ~ 28418179 (-) | True | XLOC_002830 |
| TCONS_00006073 | lncRNA | downstream | 708708 | 28382085 ~ 28385569 (-) | True | XLOC_002828 |
| TCONS_00006072 | lncRNA | downstream | 708723 | 28382085 ~ 28385554 (-) | False | XLOC_002828 |
| TCONS_00005269 | lncRNA | upstream | 26487 | 29128202 ~ 29138004 (-) | True | XLOC_002841 |
| TCONS_00006075 | lncRNA | upstream | 164555 | 29266270 ~ 29491087 (-) | True | XLOC_002843 |
| TCONS_00005294 | lncRNA | upstream | 2161137 | 31262852 ~ 31294777 (-) | False | XLOC_002858 |
| TCONS_00006076 | lncRNA | upstream | 2161137 | 31262852 ~ 31295006 (-) | True | XLOC_002858 |
| TCONS_00006077 | lncRNA | upstream | 2976096 | 32077811 ~ 32084121 (-) | False | XLOC_002862 |
| TCONS_00005261 | mRNA | downstream | 258465 | 28736876 ~ 28835812 (-) | True | XLOC_002836 |
| TCONS_00005260 | mRNA | downstream | 258506 | 28733021 ~ 28835771 (-) | False | XLOC_002836 |
| TCONS_00005259 | mRNA | downstream | 332823 | 28731749 ~ 28761454 (-) | False | XLOC_002836 |
| TCONS_00005258 | mRNA | downstream | 574772 | 28502299 ~ 28519505 (-) | True | XLOC_002835 |
| TCONS_00005257 | mRNA | downstream | 574968 | 28498377 ~ 28519309 (-) | False | XLOC_002835 |
| TCONS_00005267 | mRNA | upstream | 11041 | 29112756 ~ 29120515 (-) | False | XLOC_002840 |
| TCONS_00005268 | mRNA | upstream | 11722 | 29113437 ~ 29120535 (-) | True | XLOC_002840 |
| TCONS_00005270 | mRNA | upstream | 124465 | 29226180 ~ 29236860 (-) | True | XLOC_002842 |
| TCONS_00005272 | mRNA | upstream | 168283 | 29269998 ~ 29272757 (-) | False | XLOC_002844 |
| TCONS_00005271 | mRNA | upstream | 168283 | 29269998 ~ 29272757 (-) | True | XLOC_002844 |
| TCONS_00005263 | other | downstream | 170644 | 28923517 ~ 28923633 (-) | True | XLOC_002838 |
| TCONS_00005262 | other | downstream | 172026 | 28922135 ~ 28922251 (-) | True | XLOC_002837 |
| TCONS_00005252 | other | downstream | 639106 | 28454500 ~ 28455171 (-) | True | XLOC_002833 |
| TCONS_00005251 | other | downstream | 645409 | 28447906 ~ 28448868 (-) | True | XLOC_002832 |
| TCONS_00005250 | other | downstream | 650537 | 28442740 ~ 28443740 (-) | True | XLOC_002831 |
| TCONS_00005273 | other | upstream | 606353 | 29708068 ~ 29708182 (-) | True | XLOC_002845 |
| TCONS_00005276 | other | upstream | 634471 | 29736186 ~ 29739108 (-) | True | XLOC_002847 |
| TCONS_00005286 | other | upstream | 1429428 | 30531143 ~ 30531257 (-) | True | XLOC_002854 |
| TCONS_00005293 | other | upstream | 1919641 | 31021356 ~ 31104754 (-) | True | XLOC_002857 |
| TCONS_00005308 | other | upstream | 3440821 | 32542536 ~ 32610769 (-) | False | XLOC_002866 |
