Gene
RNA
| Item | Value |
|---|---|
| RNA id | TCONS_00058490 |
| length | 907 |
| RNA type | processed_transcript |
| GC content | 0.48 |
| exon number | 4 |
| gene id | XLOC_029813 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_007116.7 |
| NCBI id | CM002889.2 |
| chromosome length | 72500376 |
| location | 4016271 ~ 4052298 (+) |
| genome version | GRCz11_2017_zebrafish_Genome |
| species | zebrafish (Danio rerio) |
| id | name | namespace |
|---|---|---|
| GO:0008150 | biological_process | biological_process |
| GO:0005634 | nucleus | cellular_component |
| GO:0005737 | cytoplasm | cellular_component |
| GO:0003674 | molecular_function | molecular_function |
| id | description |
|---|---|
| ZDB-GENE-060929-52 | Predicted to be active in cytoplasm and nucleus. Orthologous to human GGNBP2 (gametogenetin binding protein 2). |
| ensembl_id | ENSDART00000132056 |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TCONS_00058479 | lncRNA | upstream | 553510 | 3457557 ~ 3462861 (+) | True | XLOC_029808 |
| TCONS_00058478 | lncRNA | upstream | 558694 | 3448497 ~ 3457677 (+) | False | XLOC_029808 |
| TCONS_00061617 | lncRNA | upstream | 845271 | 3169745 ~ 3171100 (+) | False | XLOC_029807 |
| TCONS_00061616 | lncRNA | upstream | 1273503 | 2734234 ~ 2742868 (+) | True | XLOC_029804 |
| TCONS_00061615 | lncRNA | upstream | 1562357 | 2451902 ~ 2454014 (+) | True | XLOC_029800 |
| TCONS_00058493 | lncRNA | downstream | 21814 | 4046771 ~ 4049096 (+) | True | XLOC_029813 |
| TCONS_00058496 | lncRNA | downstream | 307263 | 4332220 ~ 4335463 (+) | False | XLOC_029816 |
| TCONS_00061620 | lncRNA | downstream | 884397 | 4909354 ~ 4914933 (+) | False | XLOC_029823 |
| TCONS_00061621 | lncRNA | downstream | 884729 | 4909686 ~ 4912079 (+) | True | XLOC_029823 |
| TCONS_00061622 | lncRNA | downstream | 1138306 | 5163263 ~ 5171332 (+) | False | XLOC_029824 |
| TCONS_00058485 | mRNA | upstream | 5322 | 4006837 ~ 4011049 (+) | True | XLOC_029812 |
| TCONS_00058484 | mRNA | upstream | 78656 | 3927989 ~ 3937715 (+) | True | XLOC_029811 |
| TCONS_00058483 | mRNA | upstream | 107522 | 3892551 ~ 3908849 (+) | True | XLOC_029810 |
| TCONS_00058482 | mRNA | upstream | 107523 | 3891530 ~ 3908848 (+) | False | XLOC_029810 |
| TCONS_00058481 | mRNA | upstream | 108837 | 3891485 ~ 3907534 (+) | False | XLOC_029810 |
| TCONS_00058494 | mRNA | downstream | 29747 | 4054704 ~ 4142955 (+) | True | XLOC_029814 |
| TCONS_00058495 | mRNA | downstream | 273679 | 4298636 ~ 4318689 (+) | True | XLOC_029815 |
| TCONS_00058498 | mRNA | downstream | 307263 | 4332220 ~ 4342795 (+) | False | XLOC_029816 |
| TCONS_00058499 | mRNA | downstream | 313917 | 4338874 ~ 4342866 (+) | True | XLOC_029816 |
| TCONS_00058500 | mRNA | downstream | 341474 | 4366431 ~ 4374375 (+) | False | XLOC_029817 |
| TCONS_00058477 | other | upstream | 845545 | 3170736 ~ 3170826 (+) | True | XLOC_029807 |
| TCONS_00058475 | other | upstream | 1182045 | 2815026 ~ 2834326 (+) | True | XLOC_029805 |
| TCONS_00058472 | other | upstream | 1452110 | 2564145 ~ 2564261 (+) | True | XLOC_029802 |
| TCONS_00058471 | other | upstream | 1542744 | 2473511 ~ 2473627 (+) | True | XLOC_029801 |
| TCONS_00058470 | other | upstream | 1969281 | 2002817 ~ 2047090 (+) | True | XLOC_029798 |
| TCONS_00058497 | other | downstream | 307263 | 4332220 ~ 4342767 (+) | False | XLOC_029816 |
| TCONS_00058507 | other | downstream | 1327114 | 5352071 ~ 5352187 (+) | True | XLOC_029826 |
| TCONS_00058510 | other | downstream | 1590374 | 5615331 ~ 5615446 (+) | True | XLOC_029828 |
| TCONS_00058515 | other | downstream | 2674163 | 6699120 ~ 6705073 (+) | True | XLOC_029832 |
| TCONS_00058523 | other | downstream | 2833182 | 6858139 ~ 6863720 (+) | True | XLOC_029836 |
