Gene
RNA
| Item | Value |
|---|---|
| RNA id | TCONS_00005488 |
| length | 857 |
| RNA type | mRNA |
| GC content | 0.46 |
| exon number | 5 |
| gene id | XLOC_002978 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_007121.7 |
| NCBI id | CM002894.2 |
| chromosome length | 45420867 |
| location | 39314578 ~ 39321367 (-) |
| genome version | GRCz11_2017_zebrafish_Genome |
| species | zebrafish (Danio rerio) |
| id | name | namespace |
|---|---|---|
| GO:0048513 | animal organ development | biological_process |
| GO:0060396 | growth hormone receptor signaling pathway | biological_process |
| GO:0042531 | positive regulation of tyrosine phosphorylation of STAT protein | biological_process |
| GO:0043434 | response to peptide hormone | biological_process |
| GO:0051877 | pigment granule aggregation in cell center | biological_process |
| GO:0031667 | response to nutrient levels | biological_process |
| GO:0046427 | positive regulation of receptor signaling pathway via JAK-STAT | biological_process |
| GO:0045927 | positive regulation of growth | biological_process |
| GO:0005576 | extracellular region | cellular_component |
| GO:0005615 | extracellular space | cellular_component |
| GO:0005131 | growth hormone receptor binding | molecular_function |
| GO:0005179 | hormone activity | molecular_function |
| GO:0070186 | growth hormone activity | molecular_function |
| id | description |
|---|---|
| ZDB-GENE-060123-1 | Predicted to enable growth hormone activity and growth hormone receptor binding activity. Acts upstream of or within pigment granule aggregation in cell center and response to peptide hormone. Predicted to be located in extracellular region. Predicted to be active in extracellular space. Is expressed in hypophysis and pars intermedia. |
| ensembl_id | ENSDART00000129647 |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TCONS_00006122 | lncRNA | downstream | 224490 | 39087325 ~ 39090088 (-) | True | XLOC_002973 |
| TCONS_00005778 | lncRNA | downstream | 650344 | 38663993 ~ 38664234 (-) | True | XLOC_002970 |
| TCONS_00005474 | lncRNA | downstream | 787868 | 38511908 ~ 38526710 (-) | True | XLOC_002969 |
| TCONS_00006121 | lncRNA | downstream | 799047 | 38511908 ~ 38515531 (-) | False | XLOC_002969 |
| TCONS_00006120 | lncRNA | downstream | 883483 | 38412930 ~ 38431095 (-) | False | XLOC_002967 |
| TCONS_00005520 | lncRNA | upstream | 1168270 | 40489637 ~ 40490637 (-) | True | XLOC_003004 |
| TCONS_00005521 | lncRNA | upstream | 1176792 | 40498159 ~ 40499209 (-) | True | XLOC_003005 |
| TCONS_00005779 | lncRNA | upstream | 1299614 | 40620981 ~ 40621955 (-) | True | XLOC_003023 |
| TCONS_00006123 | lncRNA | upstream | 1529770 | 40851137 ~ 40857097 (-) | True | XLOC_003028 |
| TCONS_00005562 | lncRNA | upstream | 2046741 | 41368108 ~ 41368637 (-) | True | XLOC_003034 |
| TCONS_00005487 | mRNA | downstream | 30695 | 39268523 ~ 39283883 (-) | True | XLOC_002977 |
| TCONS_00005486 | mRNA | downstream | 33103 | 39264802 ~ 39281475 (-) | False | XLOC_002977 |
| TCONS_00005485 | mRNA | downstream | 115636 | 39178450 ~ 39198942 (-) | True | XLOC_002976 |
| TCONS_00005481 | mRNA | downstream | 159800 | 39133410 ~ 39154778 (-) | False | XLOC_002975 |
| TCONS_00005489 | mRNA | upstream | 1009824 | 40331191 ~ 40366360 (-) | False | XLOC_002979 |
| TCONS_00005490 | mRNA | upstream | 1010894 | 40332261 ~ 40333319 (-) | False | XLOC_002979 |
| TCONS_00005491 | mRNA | upstream | 1016021 | 40337388 ~ 40366360 (-) | False | XLOC_002979 |
| TCONS_00005492 | mRNA | upstream | 1016883 | 40338250 ~ 40339310 (-) | False | XLOC_002979 |
| TCONS_00005493 | mRNA | upstream | 1025713 | 40347080 ~ 40348132 (-) | True | XLOC_002980 |
| TCONS_00005472 | other | downstream | 880079 | 38434383 ~ 38434499 (-) | True | XLOC_002968 |
| TCONS_00005468 | other | downstream | 938325 | 38376134 ~ 38376253 (-) | True | XLOC_002966 |
| TCONS_00005467 | other | downstream | 998508 | 38290887 ~ 38316070 (-) | False | XLOC_002965 |
| TCONS_00005463 | other | downstream | 1240187 | 38074312 ~ 38074391 (-) | True | XLOC_002962 |
| TCONS_00005461 | other | downstream | 1242410 | 38072077 ~ 38072168 (-) | True | XLOC_002963 |
| TCONS_00005497 | other | upstream | 1053643 | 40375010 ~ 40375996 (-) | True | XLOC_002983 |
| TCONS_00005499 | other | upstream | 1062415 | 40383782 ~ 40384432 (-) | True | XLOC_002985 |
| TCONS_00005503 | other | upstream | 1082627 | 40403994 ~ 40404331 (-) | True | XLOC_002989 |
| TCONS_00005507 | other | upstream | 1097440 | 40418807 ~ 40419059 (-) | True | XLOC_002993 |
| TCONS_00005514 | other | upstream | 1147005 | 40468372 ~ 40469394 (-) | True | XLOC_003000 |
