Gene
RNA
| Item | Value |
|---|---|
| RNA id | TCONS_00065436 |
| length | 523 |
| RNA type | mRNA |
| GC content | 0.50 |
| exon number | 1 |
| gene id | XLOC_033412 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_007118.7 |
| NCBI id | CM002891.2 |
| chromosome length | 74282399 |
| location | 5910467 ~ 5910989 (+) |
| genome version | GRCz11_2017_zebrafish_Genome |
| species | zebrafish (Danio rerio) |
| id | name | namespace |
|---|---|---|
| GO:0006334 | nucleosome assembly | biological_process |
| GO:0000786 | nucleosome | cellular_component |
| GO:0005634 | nucleus | cellular_component |
| GO:0005694 | chromosome | cellular_component |
| GO:0003677 | DNA binding | molecular_function |
| GO:0046982 | protein heterodimerization activity | molecular_function |
| id | description |
|---|---|
| ZDB-GENE-121214-203 | Predicted to enable DNA binding activity. Predicted to be involved in nucleosome assembly. Predicted to be located in chromosome and nucleus. Predicted to be part of nucleosome. |
| ensembl_id | ENSDART00000173232 |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TCONS_00068547 | lncRNA | upstream | 82967 | 5826581 ~ 5827500 (+) | True | XLOC_033406 |
| TCONS_00068544 | lncRNA | upstream | 92091 | 5814145 ~ 5818376 (+) | False | XLOC_033405 |
| TCONS_00068548 | lncRNA | downstream | 32821 | 5943810 ~ 5947127 (+) | True | XLOC_033416 |
| TCONS_00068770 | lncRNA | downstream | 67669 | 5978658 ~ 6243430 (+) | True | XLOC_033427 |
| TCONS_00068549 | lncRNA | downstream | 142856 | 6053845 ~ 6057362 (+) | True | XLOC_033428 |
| TCONS_00068550 | lncRNA | downstream | 338403 | 6249392 ~ 6252661 (+) | True | XLOC_033429 |
| TCONS_00068771 | lncRNA | downstream | 1354693 | 7265682 ~ 7275388 (+) | True | XLOC_033443 |
| TCONS_00065435 | mRNA | upstream | 791 | 5909271 ~ 5909676 (+) | True | XLOC_033411 |
| TCONS_00065434 | mRNA | upstream | 1884 | 5908077 ~ 5908583 (+) | True | XLOC_033410 |
| TCONS_00065433 | mRNA | upstream | 3472 | 5906327 ~ 5906995 (+) | True | XLOC_033409 |
| TCONS_00065432 | mRNA | upstream | 4727 | 5905091 ~ 5905740 (+) | True | XLOC_033408 |
| TCONS_00065431 | mRNA | upstream | 5869 | 5904020 ~ 5904598 (+) | True | XLOC_033407 |
| TCONS_00065437 | mRNA | downstream | 681 | 5911670 ~ 5912374 (+) | True | XLOC_033413 |
| TCONS_00065438 | mRNA | downstream | 2041 | 5913030 ~ 5913529 (+) | True | XLOC_033414 |
| TCONS_00065439 | mRNA | downstream | 9676 | 5920665 ~ 5942776 (+) | False | XLOC_033415 |
| TCONS_00065440 | mRNA | downstream | 25612 | 5936601 ~ 5938834 (+) | True | XLOC_033415 |
| TCONS_00065441 | mRNA | downstream | 37394 | 5948383 ~ 5948685 (+) | True | XLOC_033417 |
| TCONS_00065428 | other | upstream | 340273 | 5569548 ~ 5570194 (+) | False | XLOC_033402 |
| TCONS_00065420 | other | upstream | 720571 | 5189778 ~ 5189896 (+) | True | XLOC_033396 |
| TCONS_00065416 | other | upstream | 911196 | 4998793 ~ 4999271 (+) | True | XLOC_033393 |
| TCONS_00065411 | other | upstream | 944130 | 4966092 ~ 4966337 (+) | True | XLOC_033390 |
| TCONS_00065402 | other | upstream | 1028780 | 4880423 ~ 4881687 (+) | False | XLOC_033375 |
| TCONS_00065457 | other | downstream | 786984 | 6697973 ~ 6698091 (+) | True | XLOC_033435 |
| TCONS_00065458 | other | downstream | 845217 | 6756206 ~ 6800689 (+) | False | XLOC_033436 |
| TCONS_00065469 | other | downstream | 1137267 | 7048256 ~ 7093901 (+) | True | XLOC_033440 |
| TCONS_00065483 | other | downstream | 1861176 | 7772165 ~ 7772378 (+) | True | XLOC_033453 |
| TCONS_00065484 | other | downstream | 1867974 | 7778963 ~ 7779176 (+) | True | XLOC_033454 |
