Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_039810113.1 |
| length | 1360 |
| RNA type | mRNA |
| GC content | 0.47 |
| exon number | 5 |
| gene id | LOC120564867 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_053120.1 |
| NCBI id | CM020917.1 |
| chromosome length | 41568296 |
| location | 28102486 ~ 28112239 (-) |
| genome version | GENO_Pfluv_1.0_2020_eurasian_perch_Genome |
| species | eurasian perch (Perca fluviatilis) |
| id | name | namespace |
|---|---|---|
| GO:0007264 | small GTPase mediated signal transduction | biological_process |
| GO:0015031 | protein transport | biological_process |
| GO:0005525 | GTP binding | molecular_function |
| id | description |
|---|---|
| K07905 | RAB11B; Ras-related protein Rab-11B |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU133452 | lncRNA | downstream | 1157 | 28097291 ~ 28101329 (-) | True | G98908 |
| TU133446 | lncRNA | downstream | 11903 | 28088449 ~ 28090583 (-) | True | G98903 |
| TU133447 | lncRNA | downstream | 11903 | 28088449 ~ 28090583 (-) | False | G98903 |
| TU133372 | lncRNA | downstream | 75246 | 28025703 ~ 28027240 (-) | True | G98852 |
| TU133336 | lncRNA | downstream | 119962 | 27981587 ~ 27982524 (-) | True | G98819 |
| XR_005640168.1 | lncRNA | upstream | 2325 | 28114564 ~ 28119361 (-) | True | LOC120564868 |
| TU133488 | lncRNA | upstream | 87123 | 28199362 ~ 28269725 (-) | False | G98938 |
| TU133489 | lncRNA | upstream | 87123 | 28199362 ~ 28269725 (-) | False | G98938 |
| TU133492 | lncRNA | upstream | 87123 | 28199362 ~ 28269725 (-) | False | G98938 |
| TU133491 | lncRNA | upstream | 150565 | 28262804 ~ 28269725 (-) | False | G98938 |
| XM_039810564.1 | mRNA | downstream | 80767 | 28018136 ~ 28021719 (-) | True | polr2eb |
| XM_039812527.1 | mRNA | downstream | 210501 | 27879315 ~ 27891985 (-) | True | tm6sf2 |
| XM_039812485.1 | mRNA | downstream | 237492 | 27855667 ~ 27864994 (-) | True | hapln4 |
| XM_039810833.1 | mRNA | downstream | 483667 | 27615442 ~ 27618819 (-) | False | LOC120565230 |
| XM_039810836.1 | mRNA | downstream | 489161 | 27607635 ~ 27613325 (-) | False | borcs8 |
| XM_039810101.1 | mRNA | upstream | 15042 | 28127281 ~ 28137246 (-) | True | fsd1 |
| XM_039810102.1 | mRNA | upstream | 15042 | 28127281 ~ 28137068 (-) | False | fsd1 |
| XM_039812122.1 | mRNA | upstream | 59547 | 28171786 ~ 28177428 (-) | False | scamp4 |
| XM_039812121.1 | mRNA | upstream | 59547 | 28171786 ~ 28177427 (-) | True | scamp4 |
| XM_039810332.1 | mRNA | upstream | 84726 | 28196965 ~ 28204422 (-) | False | ubxn6 |
| TU133288 | other | downstream | 274179 | 27825065 ~ 27828307 (-) | True | G98781 |
| TU133284 | other | downstream | 371929 | 27729681 ~ 27730557 (-) | True | G98777 |
| TU133255 | other | downstream | 483715 | 27615476 ~ 27618771 (-) | True | LOC120565230 |
| TU133187 | other | downstream | 590125 | 27511469 ~ 27512361 (-) | False | mau2 |
| TU133085 | other | downstream | 1010888 | 27090234 ~ 27091598 (-) | True | G98612 |
| TU133486 | other | upstream | 151286 | 28263525 ~ 28269725 (-) | True | G98938 |
| TU133487 | other | upstream | 151286 | 28263525 ~ 28269725 (-) | False | G98938 |
| XR_005640190.1 | other | upstream | 492130 | 28604369 ~ 28637021 (-) | False | LOC120565123 |
| XR_005640256.1 | other | upstream | 854796 | 28967035 ~ 28978444 (-) | False | atg4b |
| XR_005640255.1 | other | upstream | 854812 | 28967051 ~ 28978444 (-) | False | atg4b |
