RNA id: TCONS_00069666


Basic Information

Item Value
RNA id TCONS_00069666
length 5883
RNA type mRNA
GC content 0.46
exon number 11
gene id XLOC_035518
representative True

Chromosome Information

Item Value
chromosome id NC_007119.7
NCBI id CM002892.2
chromosome length 54304671
location 14915332 ~ 14985276 (+)
genome version GRCz11_2017_zebrafish_Genome
species zebrafish
(Danio rerio)

Sequence

GAATCCTCAACACATCGGGTCTGTGTTTTGTTCCATGTGAGATTAGACATTAGTCTAGCGCCGCTAGATTATGACATTGAGGACCCTTCCGTCCAGCAGCAGTTTTGAGGAAGAGTGGGTCAGGCTGACCAAACTACCCAGCACACAGGATGACCACTATTGCCTCGCAGAAGCCCTGCACAGGCCGTTTGGACTGGACTCGACGGCGCTGACGGAGGCGGTGCGCTGGAGCTCCAAGGAGAATCTGCTGGGTGCTGCTGAAAGTGACCCCAACCTTTTTGTGGCACTTTACGACTTTGTTGCCAGTGGTGACAACACACTAAGCATCACGAAAGGAGAGAAGCTGCGAGTGTTGGGTTATAACCAGAATGGAGAATGGAGTGAAGTCCGCTCAAAGAACGGCCAGGGCTGGGTACCCAGTAACTACATCACCCCCGTAAACAGTCTGGAGAAGCACAGCTGGTACCATGGGCCCGTGTCCCGCAGCGCTGCCGAGTACCTGCTCAGTAGCTTGATCAACGGCAGCTTCCTGGTGCGGGAAAGCGAGAGCAGCCCCGGCCAGCTCTCCATCTCTCTTCGCTATGAGGGACGGGTCTATCATTACCGCATCAACACGGCCTCTGATGGAAAGGTCTATGTGACAGCAGAGAGTCGTTTCAGCACGTTAGCTGAGCTGGTTCATCATCATTCCACAGTTGCGGATGGACTGGTAACCACTCTGCATTATCCTGCTCCCAAATGCAACAAGCCCACCGTCTACGGCGTCTCTCCCATCCACGACAAGTGGGAGATGGAGCGCACCGACATCACCATGAAGCACAAATTGGGTGGAGGACAGTACGGAGAGGTGTACGTTGGAGTTTGGAAAAAGTACAACCTCACTGTAGCTGTAAAAACACTAAAGGAGGACACCATGGAGGTTGAGGAGTTTCTTAAGGAGGCCTCAGTCATGAAGGAGGTCAAACATCCCAATCTAGTACAGTTACTGGGTGTGTGTACTTTGGAGCCTCCCTTCTACATTGTGACCGAGTACATGCCCCATGGGAACCTGCTGGATTACCTGCGTGAGTGTGAAAGGGACCAGGTGAATGCTGTGGTGCTGCTCTACATGGCCACTCAGATCTCCTCCGCCATGGAGTATCTGGAGAAGAAGAACTTCATCCATAGGGACCTGGCAGCTCGTAATTGTCTAGTAGGAGAGAATCACGTGGTGAAGGTGGCTGATTTCGGACTGAGCCGTCTGATGACGGGTGACACCTACACAGCTCATGCGGGAGCCAAATTCCCCATCAAATGGACCGCACCAGAGAGTCTGGCCTACAACACCTTCTCCATCAAATCAGATGTGTGGGCATTTGGAGTTTTGCTTTGGGAGATTGCGACGTACGGCATGTCTCCATATCCAGGAATTGACCTGTCTCAGGTATATGATCTGCTGGAGAAGGGCTACCGCATGGAGCAGCCCGAAGGCTGTCCTCCTAAAGTCTACGAGCTCATGAGAGCCTGCTGGCAGTGGAGTCCACTGGATAGACCCTCATTTGCTGAGATTCATCAGGCCTTTGAAACCATGTTTCATGACTCAAGCATTTCAGAAGAGGTAGCTGAAGAGCTGTGTAAAACTGCGTCTGGTGGGCAGAGTGGAGTTGCCCACACCTTCGGCCCTGATATGCCACTCTTGCCCTCAAAGTCTCGTGGGCAGAAGAAACACTCAGAGAACAAAGAGAATATGGAGGAGGCAGGACCCCACGGCCCTGCAGGTCTTGCAACATCCCTTTTTGTTGGTGATGGCCGCTCTAGCAGCTCTCCAGCCTTGCCTCGTAAACAGCGGGATAAGTCTCCCTCTAGCCTGCTGGAGGACTGCCAGGACACCACCTTCACCCGTGATCGGAAGGCTGGCttcttcagttcattcatgaaGAAGAAGTCCATGTCCTCCTCTTCTGCTACATCCTCACCTCAGCAGCAGCAGAACCTCCCAATGCCTCCCAAGAGGAGCAGCTCTTTCAGGGAGATGGAGACCCAGCCCCATAAAAAGTATGAGCCCACGGCTGGGTTTTCaggtcctcctcctcctctgcctCAGACTGATGGATTGAGTTTCTCTCCATCTCACGGAGAGGGAAATCATGTGCAGTCCCGCTGTTGTGGGGCCACATTTGggcaaaagccttcaagttcaaaCTCTGGAGCAACTTCTGGTCAAGTGGGAAGCAGCAGTAGCTGGGGAAGCCTAGCGGGCTTTTTCACCCCTCGCCTTATTAAAAAAACTCTAGGATTGCGGACTGGTAAGTCTTCTGGAATAGACGAAGTGAGTGGAGCCAAGCCATTCCCTCGCTCCAACTCAACATCCTCTATGTCTGCTGGGTTGCCAGATTTAGAACGCATGGCATTGACGTTACCAAGAAACCGTAGCAAACCTCCACTAGAACGCACATCTTCTACCACCTCACAACCGGAAAATGGGGCAACACGACCTTCAGATGCAATCCTGAGAAAGCTTGACGAAGGTACAGCTCAGATACGGGATCGTCCCAAAGCCAAACTCTTGCCACGAGGGGTCGCAGGTGGAGTTAGGGCACCAGGTGTAGGGGGAGAGGCAGAATCGGACTCAAACACAAGGGGGAAAGATGGGCAAGATGACAGGCAAGGCTGGTCATCTCCATCCAAAACCTCTACCCTTGGTTCTGTCAATCTGCATAACCACAAAGTTCCAGTGCTGATCTCCCCGACTTTAAAGCACAGCTCGGGTGATGCACACCTAGTCGGCGTGGACTCTCAGGGCAACCGCTTCAAACTACTGTCCGATAGTGGGGATCGTGACCGACCACGTCTGGTGAAGCCAAAATGTGCACCTCCCCCACCGCCCATGCTACGCTCCCTCCAACACGCCTACAGTGCCGATGCAGCTGACGAAGTGGTCAGTGGGAACATGGAGGTCAATGGAGATACCATCAAAAGGTCGGGAAGAGAAGTCAGGGGAGCACGTCCGTCAATACCACCACCACAAGTGCCTCCAGCCCCTGTAGTTCCCTCGAGTAACAACACCACCCAAACCAAGTTGGCTAATGGTGCTTCAAGTGGCGGACCAGGCCCTACTTCAGCTAAACCCACTCTTAGACGGACTCGGCAGCAGACAGAAAGGATCCCTCTTGAGAAGATCAGTAAGGAAGCTCTTCTGGAATGTGCTGAATGTTTGAGTAGTGCTCTTCAAGGTAACTCCGAGCTTTCGTCCAGCAGCCAGGTCCTGGATGTGGGACACCAACTTTTGGACTACTGCTCGGGGTATGTTGATTGCATCCCACAGACACGTAATAAGTTTGCCTTTCGAGAGGCTGTAGGGAAACTGGAGTTGAGTCTACAGGAGCTGCGCGCTTGCTCTACGGGTGGGGGAGTGGGACTTAGTGGACCTGGGACCAGCCCAGCTCTTGACAACTTGCACATGTGCATTAAAGAGATCAGTGATGTTGTTCAAAGGTAGCCACTGTGTTTACCTGTAGCTACACCTTCCaaaactcctcctcctcctgtacCCCTtgagactttcttttttttaacctcCCAAAATCAAtctagttttatttaaatgttgggGGCAGAGAACATTCTCTAAGAAGTACCtcagaaaaatactacaaacacACTCGCTCTATCTCTTTATTGTTTACAGGTGACTTCCTCCTTGAAATTGCCAGTTGGGAACAgagttttttttgtatataagcTTTTTGTCACAACcaaaatacaattttgtttttgacaaaattttctttttaatCAATATTTGCAGTTTTATCTTGATATGAGAGAATCAGTTTTTACAAAAAGACTGGGGTTACACAGGTTTGGGTCAGCCAACTGCACCATAACTGGTCTACTTAATGGTCCATTTTGTTATGTTAAAGATTTCAATTCAATTTTTGGATATTCAgtgcacatttaaacaaattacattGCATCAAAATGTCAGTGGAAACATACAAATGCCCACAATTAAGAAATCATTCATGGCTTTGTTATAATATTGCTAGTTTAAAAGAAACACTGTGGAATGCAGCAAACACAGCCAATCCAATGCACATCTCATTTTAGCCATTACATGTGCATCTCTCTACATCCCATActgtcatttttaatttgatCACATTTGTTGAACAATCCAGCTTTTGATATCCCTTGACAGTTTTATAGATCTTTTTGTAACTGGTCCTTATTTCGACATGGTCCATGTGTTATTGTTGCTCATAGTGGTTTGTGTGGCGTAGTTGAAATGGTGTTGGGTCTGTCACCACATGGATCCTATTTGGCCTTCTATATCCGTGGCCTTTCAATAATGCCCCCATCAGCCAGATGGCACAAAACTACATTCAGTCTCTCGAGTTCTCAAGAATTCTCAACTTTTATTGATTTGCTATGGGGGAATTATGATTTGTGGAAAGGAATTTATTTTGGGATGTGAATAGTGTGCCAACATTAGCAGCAACACTACATACACAAGTATTGCCAAGTCTTTTAACACAAACTGCAATTGCTTTAGCACATtgatttgtaaatttattttgatttcactTTATAATGTCGCCATTTGTAAACttgaattttaaattatttttattcaaagcaCAGGCATTTTTATGATATTGTAGATATTATTTGATACCCACGAACAGGCTGTGGAAGGTCATGCTCACTTGTGTCCTTGTGGTGAGATTTTGGTGTCAGGGTCACCATCTCTGCATCTGCATTatgaatgtattcatttgttaaaaacaggaatgttgttttgtgtgtgtgtgtgtgtttgtgtgtgtgactgcGTGTGTGTGATTGCGTTTAATTTTTCAGTCTTTTCTCAAATAGAAACAATTAAAAGAGAGATTTCTTCAGGACACAAATGGTTACACATTTTCTGAGTCTTCATAAAAATAATAGATTTCTATCAGAATTTGCATAAATGAGATTTTTGTGGGTACCCTGCAATGTCAATGTTGAAATGTAAAGAGAAAGATTTGTACCGATTACACtggagcacatttttaaacataaatgtttATTGCCTTGCCTTAATTCACTATCTAGGGTATGAAATATGGAATTAATAAAGGAAGAAATATTTTCCCCCTTCTCCATGACGGTTTCACTGCAGCAGGAAAAACATGCATCATGTTTGTTTGGAATTTTTTATTGCCACTCTGAATCATTTGCCAACGCTAACTCCTTTACCCTTTGTTTTTCTGCCATGGGCAATGTTTTCTGATATTACATGGTGCCTTTGTGAGATATTCAATGTCTGTGCACTGCAGAGTCATGTTAAAGTTCTGTTCATGTAAATGTGTTTTGCTCTCAAAAGTTCGATATTGATTTTAAGGTGGCAAATTGGAATTTTTCAAGCCTTTATCATCATTTAGACTGTCCTGGTCAGATATCTCGGGATTTGAGGTGTCCAGCTTGAAAAGGAAAAAGTGCAATGATCTGTCCTTTACTAAAGAAAAACAGTGCTTGAAGTCTGGTCTGATTTTACAGAAAGAGCTCATCATTTGGTCAGGAAAACCTCTCTTGTAATCACATTGGGAAGATTTTTGATTTAAGTTTGTCTTTGAAACACGTGCAGGTCATCTATTCCATTTATTATTATGTCTGGAAATATTTGGTGAGCAAGCTGAGGGGGAAGAGTTTTGTATGTCAGTTTTACATGATTGTCAGGGAGTATTTTGCCTTTTTAAATTCCTTTTTGTAGTGAAACagctatttttttctcccattcatTTTCACCTAACATCACAGTTTGTATTTTAATTAGGTCTTTTTAGCCATAATCAGaaggttttgttttaaatgttcttccataaattaatcaaattagctatgtttccatccaaaaatgcg

Function

GO:

id name namespace
GO:0006468 protein phosphorylation biological_process
GO:0016310 phosphorylation biological_process
GO:0016740 transferase activity molecular_function
GO:0005524 ATP binding molecular_function
GO:0000166 nucleotide binding molecular_function
GO:0004672 protein kinase activity molecular_function
GO:0016301 kinase activity molecular_function
GO:0004713 protein tyrosine kinase activity molecular_function
GO:0004715 non-membrane spanning protein tyrosine kinase activity molecular_function

KEGG:

id description
ko04012 ErbB signaling pathway
ko04014 Ras signaling pathway
ko05208 Chemical carcinogenesis - reactive oxygen species
ko05416 Viral myocarditis
ko01001 Protein kinases

ZFIN:

id description
ZDB-GENE-020809-2 Predicted to enable protein tyrosine kinase activity. Predicted to act upstream of or within protein phosphorylation. Is expressed in adaxial cell; myotome; and somite. Orthologous to human ABL2 (ABL proto-oncogene 2, non-receptor tyrosine kinase).

Ensembl:

ensembl_id ENSDART00000041697

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TCONS_00071920 lncRNA upstream 306946 14612986 ~ 14652650 (+) True XLOC_035513
TCONS_00072165 lncRNA upstream 398166 14558645 ~ 14561430 (+) True XLOC_035512
TCONS_00072164 lncRNA upstream 713243 14241585 ~ 14246353 (+) True XLOC_035509
TCONS_00069651 lncRNA upstream 939457 13971417 ~ 14020139 (+) True XLOC_035505
TCONS_00072166 lncRNA downstream 86796 15069700 ~ 15080573 (+) False XLOC_035519
TCONS_00069673 lncRNA downstream 262204 15245108 ~ 15249624 (+) True XLOC_035520
TCONS_00069680 lncRNA downstream 493721 15476625 ~ 15479807 (+) True XLOC_035525
TCONS_00072167 lncRNA downstream 1276682 16259586 ~ 16265811 (+) True XLOC_035527
TCONS_00072168 lncRNA downstream 1581049 16563953 ~ 16582042 (+) True XLOC_035529
TCONS_00069662 mRNA upstream 49373 14886452 ~ 14910223 (+) False XLOC_035517
TCONS_00069663 mRNA upstream 49726 14890821 ~ 14909870 (+) True XLOC_035517
TCONS_00069661 mRNA upstream 75904 14855471 ~ 14883692 (+) True XLOC_035516
TCONS_00069658 mRNA upstream 131146 14778292 ~ 14828450 (+) False XLOC_035514
TCONS_00069659 mRNA upstream 140819 14792830 ~ 14818777 (+) True XLOC_035514
TCONS_00069667 mRNA downstream 3929 14986833 ~ 15078295 (+) False XLOC_035519
TCONS_00069668 mRNA downstream 3929 14986833 ~ 15080367 (+) False XLOC_035519
TCONS_00069669 mRNA downstream 4102 14987006 ~ 15078542 (+) False XLOC_035519
TCONS_00069672 mRNA downstream 256645 15239549 ~ 15250265 (+) False XLOC_035520
TCONS_00069674 mRNA downstream 268544 15251448 ~ 15253800 (+) True XLOC_035521
TCONS_00069660 other upstream 153306 14806174 ~ 14806290 (+) True XLOC_035515
TCONS_00069656 other upstream 543773 14415698 ~ 14415823 (+) True XLOC_035511
TCONS_00069654 other upstream 789024 14169903 ~ 14170572 (+) True XLOC_035508
TCONS_00069647 other upstream 1015455 13888818 ~ 13944141 (+) False XLOC_035504
TCONS_00069632 other upstream 1806018 13143165 ~ 13153578 (+) True XLOC_035494
TCONS_00069670 other downstream 86796 15069700 ~ 15078299 (+) False XLOC_035519
TCONS_00069671 other downstream 95216 15078120 ~ 15080573 (+) True XLOC_035519
TCONS_00069676 other downstream 271701 15254605 ~ 15259417 (+) True XLOC_035522
TCONS_00069678 other downstream 286959 15269863 ~ 15275437 (+) True XLOC_035523
TCONS_00069685 other downstream 1040566 16023470 ~ 16079793 (+) False XLOC_035526

Expression Profile

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Homologous

species RNA id representative length rna type GC content exon number chromosome id location
grasscarp (Ctenopharyngodon idella) CI01000010_05594817_05606739.mRNA True 4561 mRNA 0.49 11 CI01000010 5593631 ~ 5606739 (-)