RNA id: TU204412


Basic Information

Item Value
RNA id TU204412
length 517
RNA type TUCP
GC content 0.49
exon number 3
gene id G150960
representative False

Chromosome Information

Item Value
chromosome id NC_053126.1
NCBI id CM020923.1
chromosome length 38831509
location 2148731 ~ 2216999 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence

catattggactaaaatagttcacagaGACATGTTACTGGGAACATCTGGAGAGAGAaatagggtgtgtgtgtctgtgtgtgtgtctgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtctgtgtgtgtgtctgtgtgtgtgtctgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtctgtgtgtgtgtctgtgtgtctgtgtgtgtgtgtgtgtgtgtctgtgtgtgtgtctgtgtgtgtgtgtgtgtctctgtgtgtgtgtgtgtctctgtgtgtgtgtgtgtgtctgtgtgtctctgtgtgtgtgtgtgtgtgtgtgtgtctgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtctgtgtctgtgtgtctgtgtgtgtctgtctctgtgtgtgtgtgtctgtctctgtgtgtgtgtgtctgtctctgtgtgtgtgtctgtgtgtgtatgtgtctgtgtgtgtatgtctgtgtgtgtgtgtgtctgtgtgtgtgtctgtgtgtgtgtgcg

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU204399 lncRNA upstream 1705 2145332 ~ 2147026 (+) True G150958
TU204386 lncRNA upstream 27062 2121337 ~ 2121669 (+) True G150948
TU204387 lncRNA upstream 27062 2121337 ~ 2121669 (+) False G150948
TU204384 lncRNA upstream 53916 2094208 ~ 2094815 (+) True G150947
TU204552 lncRNA downstream 57814 2274813 ~ 2275121 (+) True G151045
TU204565 lncRNA downstream 89970 2306969 ~ 2307300 (+) True G151052
TU204568 lncRNA downstream 119035 2336034 ~ 2397394 (+) True G151054
TU204576 lncRNA downstream 133322 2350321 ~ 2351235 (+) True G151062
TU204578 lncRNA downstream 134852 2351851 ~ 2353552 (+) True G151063
XM_039825806.1 mRNA upstream 29608 2091477 ~ 2119123 (+) True LOC120575157
XM_039823746.1 mRNA upstream 372160 1769076 ~ 1776571 (+) False LOC120573865
XM_039823745.1 mRNA upstream 372162 1769076 ~ 1776569 (+) False LOC120573865
XM_039823747.1 mRNA upstream 373437 1767641 ~ 1775294 (+) True LOC120573865
XM_039825098.1 mRNA upstream 650631 1485594 ~ 1498100 (+) True jmjd8
XM_039823730.1 mRNA downstream 236751 2453750 ~ 2459249 (+) True trappc5
XM_039825281.1 mRNA downstream 244244 2461243 ~ 2493919 (+) True LOC120574835
XM_039825282.1 mRNA downstream 244244 2461243 ~ 2493919 (+) False LOC120574835
XM_039824508.1 mRNA downstream 303716 2520715 ~ 2581298 (+) True wu:fb95e10
XM_039824509.1 mRNA downstream 311841 2528840 ~ 2581298 (+) False wu:fb95e10
TU204330 other upstream 81083 1936920 ~ 2067648 (+) True G150905
TU204182 other upstream 379837 1761280 ~ 1768894 (+) True G150804
TU203548 other upstream 823631 1324062 ~ 1325100 (+) False G150386
TU203550 other upstream 823631 1324062 ~ 1325100 (+) True G150386
TU203663 other upstream 847973 1295618 ~ 1300758 (+) True G150465
TU204682 other downstream 468104 2685103 ~ 2689038 (+) False LOC120574078
TU204669 other downstream 472721 2689720 ~ 2691562 (+) False LOC120574078
TU204708 other downstream 582470 2799469 ~ 2802221 (+) True G151122
TU204936 other downstream 784900 3001899 ~ 3003364 (+) True G151240
TU205031 other downstream 929505 3146504 ~ 3147977 (+) True G151315

Expression Profile