RNA id: TU206993


Basic Information

Item Value
RNA id TU206993
length 420
lncRNA type inter_gene
GC content 0.45
exon number 4
gene id G152823
representative True

Chromosome Information

Item Value
chromosome id NC_053126.1
NCBI id CM020923.1
chromosome length 38831509
location 8088994 ~ 8092206 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence

ATATAACCAACTTTGAAGTGACATTATtgtaaattcagtttttcatgACGAATAAGCAGCATATGTCAGGCTTCATTTTCCAAACTGGAGTTCACTCAGTTGCTGTGTCCTGTTCCAGTGATGAGAGCATCTGATGCTCACCAGTCTTGAGATGATGGCCTATCATGTcTTGTGATGCTCACTGTTGTCATTTGTGGGTTTCTGCTGCTCCATTGCTCTTCATGTATGGCACGTCTTTCTCAATGGGCTCTTTCTGCGGTTTGATTTTGCTGGAGAATCTCTGCCTCAGGATGAGAGCGATGGTGGTCAGGACCACCATCGTGGTACACATGGTCCTACCTCCAAGGATCTCCTGCCTTGGAACAGATGGTGGTTTAGAGCACTGAGACTTCTCCTCCCATTGAAAGGTTTCAATAGTAA

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
XR_005641919.1 lncRNA upstream 15478 8071892 ~ 8073516 (+) True LOC120574886
TU206981 lncRNA upstream 15488 8071918 ~ 8073506 (+) False LOC120574886
TU206961 lncRNA upstream 116634 7972083 ~ 7972360 (+) True G152801
TU206953 lncRNA upstream 145306 7942541 ~ 7943688 (+) True G152794
TU206916 lncRNA upstream 513117 7569836 ~ 7575877 (+) True G152759
TU206999 lncRNA downstream 20180 8112386 ~ 8112614 (+) True G152826
TU207131 lncRNA downstream 161316 8253522 ~ 8254810 (+) True G152916
TU207157 lncRNA downstream 294310 8386516 ~ 8386743 (+) True G152942
XR_005641949.1 lncRNA downstream 404141 8496347 ~ 8501904 (+) True LOC120575098
TU207190 lncRNA downstream 404307 8496513 ~ 8501898 (+) False LOC120575098
XM_039825371.1 mRNA upstream 55979 8016997 ~ 8033015 (+) True LOC120574880
XM_039825372.1 mRNA upstream 58113 8016996 ~ 8030881 (+) False LOC120574880
XM_039825022.1 mRNA downstream 9999 8102205 ~ 8112057 (+) True LOC120574676
XM_039825023.1 mRNA downstream 9999 8102205 ~ 8112057 (+) False LOC120574676
XM_039825024.1 mRNA downstream 10001 8102207 ~ 8112057 (+) False LOC120574676
XM_039825837.1 mRNA downstream 57147 8149353 ~ 8210405 (+) True LOC120575181
XM_039825361.1 mRNA downstream 143936 8236142 ~ 8252307 (+) True LOC120574874
XR_005642011.1 other upstream 15689 8073236 ~ 8073305 (+) True LOC120575520
XR_005641999.1 other upstream 15913 8073008 ~ 8073081 (+) True LOC120575508
TU206790 other upstream 732156 7339993 ~ 7356838 (+) True emp2
TU206798 other upstream 815651 7270993 ~ 7273343 (+) False dexi
TU206243 other upstream 2135629 5950424 ~ 5953365 (+) False chst12a
TU207102 other downstream 35059 8127265 ~ 8127981 (+) True G152892
TU207168 other downstream 353240 8445446 ~ 8449297 (+) False mcrip1
TU207169 other downstream 353240 8445446 ~ 8449297 (+) False mcrip1
XR_005641904.1 other downstream 574264 8666470 ~ 8684765 (+) False mapk3
TU207220 other downstream 604762 8696968 ~ 8701771 (+) True ypel3

Expression Profile