RNA id: TU206798


Basic Information

Item Value
RNA id TU206798
length 2051
RNA type TUCP
GC content 0.44
exon number 2
gene id dexi
representative False

Chromosome Information

Item Value
chromosome id NC_053126.1
NCBI id CM020923.1
chromosome length 38831509
location 7270128 ~ 7274611 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence

TGCCGAGGCTTCAGGTGTCGCTTTGTGGTCAGGACTGTTTTGATGCACTTGACTAAAATGTTAGGGACGGTTAGCCGTAAAAACATCTGCAGAAGCGTGTATTTTTCAATGTTTCGTATTTCCCGGACGGATGTTTAACGGTATAAAAGAAAACTCCAAATAACTTGGCTTCAAGAAATGTTCGCATTTCTTTTCACTAGCATTGCATGCTACTGTTTTTAGCCCTAGCCAGCTGGCATGGCTTGAATTCCGCAAACCCAAAGAATGCGTCGAGCTAGCTAACGGGGTATTTTGATACTTTCTGCCGGTTATTTTTAGCTATGAAACTTACGACCTATGTTGCTGTTGTTTTCTTCTGTACCTTTTTACAAATACAATATAGCACTTAAAAGCTGCCTCTCAATCACTGTTTGCAGATCGGGACGAGCCGAAATGGACGCCCCGTCACCCCAGCAGACAGATTTCTAGTGGTGACACCAGCAACTCCAGTCCGCCACATCCTGGCCCCGCAAGAACCCAAACCGCGGCTCTCTTGTTTTTCTATGACCCATCCAATTTATGCCCAGCTAGATTCGGTAGAATCGCTGTTGGACGAACTTCCATATATGTTTTATCTGGGCCTGTTCTTTGTGAACGTCCTGATCCTCTATTATGCCTTTCTGATGGAGTACATCGTCCTAAATGTGGGGATAGTATTTTTGCCTGAGGATATGGACCAGGCGCTGGTGGACCTCGGGGTGCTGTCCGACCCGGCCTCTGTCCCTTATGACACGGACAACGAGCTGGATGTTTTTGAGGGGTATCTTGAGTGACAGGGCGGTCCTGGAGCGAGGGAAATAAATGTTAGTGGCGGCGGTGATGATGCAGAGTTCCGGGGCAGATTGGACCAGCGTCAACACTCTGGTCAGTGATGTGAGGAAAACATGCCTCAAAGCGGATGCGGTTTCTCACACAGACATATCAGTGAAAAAGTAGCCTGAGGAAGCGATTCAGCACCACTGGCCACATGAACAGCGACTGTCCCATGGGAAGAGCTCTCTTCACAGGATCAGCTGCCTGTCTAGTCCGTTTCCATTCTAATAGCAGTTGACTCCAATTGGACCCCATGGAGTTAGTGCTGGCATCTGTGTCCTCCACCTTTAGACACAATGAAAGATAAAAAGGAAGCACAATGTGCTCTAAGTGGAAGGAGACGACTGATCCCTGGGGATATAAAATGAACATTACCAGAGATGTGGAGCATGACTCGGATCGTCTAAATTGCGGCCAGTTCAGAAACAGTAGCCTGATGTGGCTGGCATTTCCACTGAACAACTGCCCAGGCTGTGCAAGATCTGGTAGTCGACTGCTGAAGAAGGGAATTCAAACTTGCCACTTCAGTCACAGTGTGACGTCCTACACAGTGTGACATCTCAGAAGCACTGGCAAAGAGTTGGAAAACAATGTCCACTGTAGGTCTGTTGCATACTTAATCACTCACAGTACAActatttgtcctttttttttttttttttttttaagttttcagaATGCATTGCTACTTTGCAGGCTCATAGATCCGTGAGgtgtacatttaaaatgtgtcttttgAGGTCAtccatactgtatatttgctTCAGGGATGTAGACACTCTCAGGAGCACCGTTAGAAACTGTGGGTGCACTGGCAAGACACTGATACTAGACACAGGCTGTGAAACATAggagacccttaatctttccaAGCTCTCTTAAGAATCAGAAACACCACACTTGCCACACTCTTTACGGTAATGCAGCAAGTATTAAAGCATGAAAAAGAACCTCAGAAGAAGTGCTTCAGATAGTTGACTTTTTCATCCTTTTAATTGTTGCATtcgtgttttgtgttttttaatgttacAAATGTGTGTTAGACACAGAAAAGACTTGACGCATGATATTGGTTGTGTGTTTTAAAAAGGTTTAGTTGTCAAAGTTTGGTTTTATCACACCTTCTGTTCAGTTTGTTATGAATTTCGGAATtctgttaaaatgtatattctTGGCAGCAATAATAAACTGAATTTAAG

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU206779 lncRNA upstream 70140 7200625 ~ 7200853 (+) True G152651
TU206772 lncRNA upstream 190615 7075834 ~ 7080378 (+) True G152645
TU206760 lncRNA upstream 246343 7015730 ~ 7024650 (+) True G152635
TU206742 lncRNA upstream 351215 6915591 ~ 6919778 (+) True G152618
TU206737 lncRNA upstream 367752 6902928 ~ 6903241 (+) True G152613
TU206906 lncRNA downstream 97811 7371154 ~ 7371500 (+) True G152749
TU206914 lncRNA downstream 222209 7495552 ~ 7508697 (+) True G152757
TU206916 lncRNA downstream 296493 7569836 ~ 7575877 (+) True G152759
TU206953 lncRNA downstream 669198 7942541 ~ 7943688 (+) True G152794
TU206961 lncRNA downstream 698740 7972083 ~ 7972360 (+) True G152801
XM_039826093.1 mRNA upstream 65783 7202748 ~ 7205210 (+) True socs1a
XM_039826084.1 mRNA upstream 357472 6909798 ~ 6913521 (+) True ndufab1b
XM_039824950.1 mRNA upstream 369924 6893216 ~ 6901069 (+) True c15h16orf72
XM_039824309.1 mRNA upstream 414274 6850245 ~ 6856719 (+) True si:ch211-157c3.4
XM_039826308.1 mRNA upstream 427234 6837914 ~ 6843759 (+) True slc2a6
XM_039824629.1 mRNA downstream 66642 7339985 ~ 7354256 (+) False emp2
XM_039824630.1 mRNA downstream 71937 7345280 ~ 7354256 (+) False emp2
XM_039824631.1 mRNA downstream 84160 7357503 ~ 7369880 (+) True atf7ip2
XM_039824325.1 mRNA downstream 655576 7928919 ~ 7933457 (+) True b9d1
XM_039825370.1 mRNA downstream 702371 7975714 ~ 8012618 (+) True grapa
TU206243 other upstream 1317628 5950424 ~ 5953365 (+) False chst12a
TU206154 other upstream 1540724 5725886 ~ 5730269 (+) False G152149
TU206143 other upstream 1641721 5626227 ~ 5629272 (+) False slc29a4
TU206111 other upstream 1720447 5549291 ~ 5550546 (+) False G152125
TU206083 other upstream 1806690 5461965 ~ 5464303 (+) False rbx1
TU206790 other downstream 66650 7339993 ~ 7356838 (+) True emp2
XR_005641999.1 other downstream 799665 8073008 ~ 8073081 (+) True LOC120575508
XR_005642011.1 other downstream 799893 8073236 ~ 8073305 (+) True LOC120575520
TU207102 other downstream 853922 8127265 ~ 8127981 (+) True G152892
TU207168 other downstream 1172103 8445446 ~ 8449297 (+) False mcrip1

Expression Profile