Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_039824166.1 |
| length | 1109 |
| RNA type | mRNA |
| GC content | 0.55 |
| exon number | 8 |
| gene id | rpsa |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_053126.1 |
| NCBI id | CM020923.1 |
| chromosome length | 38831509 |
| location | 2947411 ~ 2953510 (+) |
| genome version | GENO_Pfluv_1.0_2020_eurasian_perch_Genome |
| species | eurasian perch (Perca fluviatilis) |
| id | name | namespace |
|---|---|---|
| GO:0000028 | ribosomal small subunit assembly | biological_process |
| GO:0006412 | translation | biological_process |
| GO:0007155 | cell adhesion | biological_process |
| GO:0022627 | cytosolic small ribosomal subunit | cellular_component |
| GO:0005886 | plasma membrane | cellular_component |
| GO:0005634 | nucleus | cellular_component |
| GO:0005055 | laminin receptor activity | molecular_function |
| GO:0003735 | structural constituent of ribosome | molecular_function |
| GO:0043236 | laminin binding | molecular_function |
| id | description |
|---|---|
| K02998 | RP-SAe, RPSA; small subunit ribosomal protein SAe |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU204721 | lncRNA | upstream | 2800 | 2937484 ~ 2944611 (+) | False | G151130 |
| TU204724 | lncRNA | upstream | 2800 | 2942260 ~ 2944611 (+) | True | G151130 |
| TU204726 | lncRNA | upstream | 6375 | 2940609 ~ 2941036 (+) | True | G151131 |
| TU204679 | lncRNA | upstream | 17681 | 2637789 ~ 2929730 (+) | True | G151106 |
| TU204688 | lncRNA | upstream | 217916 | 2728744 ~ 2729495 (+) | True | G151112 |
| TU204940 | lncRNA | downstream | 43599 | 2997109 ~ 2997374 (+) | True | G151243 |
| TU204941 | lncRNA | downstream | 44547 | 2998057 ~ 2998259 (+) | True | G151244 |
| TU204946 | lncRNA | downstream | 52108 | 3005618 ~ 3015522 (+) | True | G151247 |
| TU204997 | lncRNA | downstream | 130388 | 3083898 ~ 3104545 (+) | False | junbb |
| TU205001 | lncRNA | downstream | 169232 | 3122742 ~ 3141705 (+) | True | G151292 |
| XM_039824165.1 | mRNA | upstream | 5792 | 2931036 ~ 2941619 (+) | True | LOC120574090 |
| XM_039824163.1 | mRNA | upstream | 5792 | 2933118 ~ 2941619 (+) | False | LOC120574090 |
| XM_039824161.1 | mRNA | upstream | 19214 | 2873955 ~ 2928197 (+) | True | LOC120574089 |
| XM_039824162.1 | mRNA | upstream | 19214 | 2873955 ~ 2928197 (+) | False | LOC120574089 |
| XM_039824005.1 | mRNA | upstream | 86342 | 2843580 ~ 2861069 (+) | True | txn2 |
| XM_039824167.1 | mRNA | downstream | 4422 | 2957932 ~ 2986853 (+) | True | ubn2b |
| XM_039825767.1 | mRNA | downstream | 149131 | 3102641 ~ 3104592 (+) | True | junbb |
| XM_039824835.1 | mRNA | downstream | 210707 | 3164217 ~ 3255883 (+) | True | LOC120574496 |
| XM_039823688.1 | mRNA | downstream | 310586 | 3264096 ~ 3276150 (+) | True | LOC120573829 |
| XM_039824718.1 | mRNA | downstream | 330098 | 3283608 ~ 3321386 (+) | True | smarca4a |
| TU204708 | other | upstream | 145190 | 2799469 ~ 2802221 (+) | True | G151122 |
| TU204669 | other | upstream | 255849 | 2689720 ~ 2691562 (+) | False | LOC120574078 |
| TU204682 | other | upstream | 258373 | 2685103 ~ 2689038 (+) | False | LOC120574078 |
| TU204412 | other | upstream | 730412 | 2148731 ~ 2216999 (+) | False | G150960 |
| TU204410 | other | upstream | 792563 | 2148731 ~ 2154848 (+) | False | G150960 |
| TU204936 | other | downstream | 48389 | 3001899 ~ 3003364 (+) | True | G151240 |
| TU205031 | other | downstream | 192994 | 3146504 ~ 3147977 (+) | True | G151315 |
| XR_005642000.1 | other | downstream | 427777 | 3381287 ~ 3381386 (+) | True | LOC120575509 |
| XR_005642001.1 | other | downstream | 429004 | 3382514 ~ 3382613 (+) | True | LOC120575510 |
| TU205238 | other | downstream | 705487 | 3658997 ~ 3663282 (+) | True | G151471 |
