RNA id: XM_039824523.1


Basic Information

Item Value
RNA id XM_039824523.1
length 6082
RNA type mRNA
GC content 0.54
exon number 33
gene id mapk8ip3
representative False

Chromosome Information

Item Value
chromosome id NC_053126.1
NCBI id CM020923.1
chromosome length 38831509
location 8739631 ~ 8768700 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence

TGTGACGTCAGCCAGAGTCGGTCAGCTGGCTCCTCCATCTGAACAGCAGGGAGAGCCTCTCCCATAGGGAGACATCACCATCAACGCCCGAGCCTGGCCAGCAGCGTCGGCCGCCCGCTGGAAGGGGGAACAAAACATGGAGGAAACGATATTAGGCCTATAGTGGTGGATCGGGAGTCGGCGGGGATCGAGAGCGTtagattatttatttactcctatttatttattaatttatttatttcccctgCCAGCAATGGCCGGGATCCATGGCTGCGGTTGCTGAGAGGCAGGTGCAATATCATCGACGACGGCATTTCGTTCCTGGGCATGGGCTCAACGAAGGCCGATCCACAGGCTGGCCCACTCCACATCCGCTGCTCCCCGGATCAGATGCTCCCTGCGGGAGGAGAGCAGTAGCTGGGCCGCGTCTGGAGGCGATACAACGGgctggtggtggaggaggagggggcccTCTTTACATCAAAATATTAGAGCCAGTAATTTCAAGGTTATGCGCCGTTACACACAGCAACAGCCGGTGTTCGTTCAGTGAATCTGGCCTGCTGCAACATGACATAGGTGTCTTTAGTTGCAGAAAATCTGTGATTGAATGTCACCCTTTTTCTGCGGTGATCGGATCCAAACCTTGTGAAAGTCTCGCCTTACAGGCCCGAAAAACGGTTGAGCGCAGCCTCCTCATCTGGAAAACAGAAGTCGGTTCCAGTTGCCAAGATGATGGAGCTGCAGATAGACGAGGTGGTCTACCAGGACGACTACGGCTCCGGCTCCGTGATGTCGGAGCGCGTGTCGGGTTTGGCCAACAGCATCTACCGGGAGTTCGAGCGGCTGATCCGCAGCTATGACGAGGAGGTAGTGAAGGAGCTGATGCCGCTGGTGGTGAACGTCCTGGAGAACCTGGACGCGGTGCTGACCGAAAACCAGGAGCACGAAGTAGAGCTGGAGCTGCTGAAAGAGGACAACGAGCAGCTCATCACCCAGTACGAAAGGGAGAAAGCGCTTCGCAAGCAGGCAGAAGAGAAATTCATTGAATTTGAGGATGCGTTGGAAGCTGAGAAGAAGGACCTGCAGGTGCAGGTGGAGTTTTTGGAGCTGCAGGCGAAACAGCAGGAGCTCAAGACAAAGAACTATTCTGACCAGATCACACGGTTGGAGGAGCGAGAATCAGACATGAAGAAAGAGTACAATGCTCTGCACCAGCGTCACACTGAGATGATCCAGACGTACGTCGAGCACATAGAGCGGTCCAAATTGCAGCAGGCAGGGagcaacagccaatcagaaggtCCCGGCTGTGGAAGAACTCAACGCCACAAATGGAGGAAAAGCAGCAAAACGGAGCGCCCGCCTTCATTGAGTCTGTACCCCAGCGGCGAGGGCATGGTACGTGGGGGTCTCGGGGGGGCTAGGATGATGCCCGGGAAAGACATCTGGCAGGTCAGCGAGCTCGGCCAGTCGACCTTCTGCTCTGCCTATCAGGAGGATGAATCAGAGTCCGACTCAGTGGCGGCCACACCCAGCAGCACAGGAAGCAAGTCCAACACGCCCACCTCCTCCGTCCCCTCCGCCACTGTCACCCCCATCAACGAGGGCTTCCTCCCACAATCTGAATTTGATGCGATGCGGGCCGGGAACCGCAGGAAAAGTGCCAAGCGACTCAGCCGGAATATGGAGGTGCAGGTTTCTCAGGAAACCAGGAATGTCAGCATCGGTATGGGAAGCAGCGATGAGTGGTCCGAGTTTCAGGAGATCATCGATTCTACCCCTGAGCTGGACATGTGTGTGGACCCCCGTGTGTATGGAGGAGGAAACAGCCCCTCGCAGGGCATAGTGAACGAGGCCTTCGGCATCAACACCGACTCGCTCTACCACGAGATCAAAGACGCCAAGTCGGACATCATCGGAGACGTTGATGCAGGCGCCGAGCTGCTAGGCGAGTTCTCAGGGATGGGTAAGGAGGTGGAGAACCTGCTGACAGAGAACAAACAGCTCCTAGAGACCAAAAATGCTCTCAACATTGTGAAAAATGACCTTATTGCCAAAGTGGACGAACTGTCAGGGGAGCAGGAGGCGCTGAGGGAGGAGCTGGAGGCTTTGAGGCAGTCCAAGAACAAGGTGGACGTCCGAGTCAAGGAGCTGGAAGAAGAACTCAAGAGGTTAAGAGCTGAGGCTCTCGGTGCGTCTCGGGACTCCAAGGATGAAGGAGGTGACGATTTTTCATCACCCATGCAGGACGGCGACATGACGATGACGCAGCGCCGGCGGTTCACCCGGGTGGAGATGGCCCGCGTGCTGATGGAGAGGAATCAGTACAAAGAGAGACTGATGGAGCTGCAGGAGGCCGTACGGTGGACAGAGATGATCAGGGCGTCCAGGGAAAGTCCTCAgatccaagagaaaaagaaGTCCACCATCTGGCAGTTCTTTGCACGTCTCTTCAGCACATCGTCCAGCCCTCCGCCTGTCAAGCGGCCGTACTACAGCGTCAACATCCACTACAAGTCGCCCTCGCCGGCTGGTTTCTCTCAGCGACGCAGCCACACCATGTGTCAGATCTCCACCTCCAACCGCACGCTGGAGTTCTTCCCCGAAGAACTGGCCAGTAACGGTGTTGCATCTCTCCTCAGTGACTCAGCACTGTTGGCCCGCCGAGAGCAGCGGCGTGAACAGTACCGGCAGGTCCGTGAGCACATGCGCCGCGATGACGGCATCATGCAGGCCTGTGGCTGGAGCGTGCCGTCTCGCTTcaaacagACTGGCGGTCAGCCGGACAGCGCTCAGGACAGCCCGCTGAAGAGACAACAGCCCACAAACGAGAAGGAGGACAACCGCATGAAGAATGTTCCCGTCCCGGTGTACTGTCGTCCTCTGGTAGAGAAGGACCCCAACAGGAAGTTGTGGTGTGCAGCTGGAGTGGACCTGACAGGATGGAGGGCCAGCAACCAGGAGTCGGTACCAGCCAAAGCACCGTCGGGCGGCAGCGACCCCCTGCACGCTGAGGAGAACGGAGCTGGAAAGAAGAGCAGCCACAGCTCCCCAGAAAAGAGGAAGGAGCTCCAGGAAACCGACACCATGAGCAGTCGAGTGTGGATCCTCACCAGCACCCACTCTGCCAGCAAGGTGGTCATCATCGACGCCAACCAGCCGGGCTCACTGGTCGACCAGTTCAACGTCTGCAACGCCCACGTGCTCTGCATCTCCAGCGCGCCAGCTGCCAGCGAGAGCGACTATCCAGCAGGAGAGATTGTGTTGGATCCAGGTGACAGTGGAGCAGGGGGGGGAGGTGAGGATGCTGGCGGCGTGGAGGGCATGTTGGCTGGTATCACTCTTGTCGGATGTGCCACCAACTGCAGTGTCGCCCGTAGCAACTGCTCCTCGCGCACCGATACGCCCATAATGGACAAAGGACAAGCCCCTACTGCTCCCCCCATGAATGGGAAGATTCACCCTGGCCAGTCAGCCGAGGAGGCCACGGAGGCCACCGAGGTTCCCGAGTCAACGGCCAGCCACGCAGGGCTGAGATCTGGACCTCCAGGACCGTTCACTGAGCACGTCTTCACCGACCCCCAGCCTCGTTTATCAGACGCCTCTGACAGAAGCGCCGGTCAATCCAAAGACGAAACGTCTCAGCCTCCAGAGTCAGAGGACGGAGGGGAAGAGACCAAGAACTACACCAGCGTGGCCCCCACTATGTGGCTCGGGGCCCAGAACGGCTGGCTCTACGTCCACTCAGCGGTTGGAAACTGGAAGAAGTGCCTCCACTCCATCAAACTCAAAGACTCTGTGCTCAGTCTGGTACACGTGAAAGGTCGTGTGCTGGTTGCCCTCGCTGACGGGACCCTCGCCATATTCCATAGATCAGAGGatggccAGTGGGATTTATCCAACTACCACCTAATGGACCTCGGACGGCCTCATCACTCCATCCGCTGCATGGCTGTAGTACATGATAAGGTTTGGTGCGGCTACAAGAACAAGATCCACGTCATCCAGCCCAAGAGCATGCAGATCGAGAAGTCCTTCGACGCCCACCCTCGCAGGGAGAGTCAGGTGCGGCAGCTGGCGTGGATCGGTGATGGTGTGTGGGTGTCAATCCGGCTAGACTCGACCCTGCGTCTCTaccacgcgcacacacaccagcacCTCCAGGACGTGGACATCGAGCCGTACGTCAGCAAGATGCTGGGCACTGGCAAGCTGGGCTTCTCTTTTGTGCGAATCACAGCgcttctgattggtggaaaccGTCTCTGGGTAGGAACTGGAAACGGCGTGATCATCTCCATCCCGCTGACAGAGACGGTGGTCCTTCACCGGGGACAGCTCCTTGGTTTGAGGGCCAACAAGGTGTCTCCCACATCGTCCGGCGGAGTGATCCACGTGTACGGTGACGATGGCTCTGAGAAGAGCACCGGCAGCTTTATCCCCTACTGCTCCATGGCACAAGCCCAGCTCTGTTTCCATGGACACCGCGATGCTGTCAAGTTCTTTGTCTCTGTACCCGgCAATGTTCTGGCCACCCTAAACGGCAGTGTGCTGGACAGTCCATCGGAGGGGCAGGGGTCAGCAGCGCCCCAAGAGACGGAGGCCCAGAGTGTTCACAACGTGCTGGTGCTGAGCGGAGGAGAGGGCTACATCGATTTCCGTATAGgaGATGGAGAGGACGATGAGACCGAGGAAGGAGACAGTGGCGGAGCTTCGCAGATAAAACCTGCTTTGTGTAAAGCGGAGCGAAGCCACATCATCGTCTGGCAGGTGTCCTACATACCTGAGTGACACCTGGATCTGCTTTAACACCCAAACCCCACTCACCTCCTTAAAAGGAATCTCCTCTTGTCCCCAAAAAGCTTCCAGCCACCCCAAACCTTGTAATTATCCCTGGTCATGtaaaagtcccccccccccctggctCTAAAACGACCCTCCAAGCCATGTATCGTCCCTTGTAACTATTCTATCCCCTCCTGCCCCCGTCACCTTGTAACTTTAATGCCTTGTAATTACCTCCTCTGATATAGTAATCTGCCTGCCATCCTGTTTCTGTCCCACCCAGGGCATTGTAACTATCTTCATGAGCCTTGTAACCCAGCCTCATAACTACCTCCCTCCTCTGTATCAATCTTATATTCACCCTGCAAGCACACTGTATCTCCTTCTATATTTACCTCAATTGTCCTGCATCTGCCCCAGTCtactccttctcttcctccactTAGTTTGTCATCTGTGAAGCCTCCACCTTATCTTAAACCAAAGCTCAGAGCCCCAAAATTGCATCAAATTGTACcgataacaaacaaaaaaaacaagaacagcAAGTACAGAAATGTGGATGACCCCGACTTGCATTTCCACCAGAAAATTGCTCCGATTTTTTTCCTGAATAGCCAATCAACAATCCATAATAACCATAAATGCCATTATATGTTTAAACAGAGTTAATGGATGCAGGTGTCAGGTGTTTACGGATCGACAGTCTTTGACAGTGTGTGGGAGTGAAAACAAATTCTTGTTTTGGCTTTAAGATTGTAGTGGATGGCAAATGAGTTTGGTTCACAACAAATGGAAACTCAAAAGTACAACGAATTCAGGACTAAAGTCTAGGCTTTTTTTTGGGCCGTTACCCAAAATATTTTGCATCCAATTTTGCAGTCACGTCTATTTAGAGTCTTGATTAACGACCTTGCTCATTTTCTACCCTGAAATGGTAAAAAGAGGATATAATGGCAATGTGCGAGAACAGACCCAAAATGATAGGAAATCTCTAATGCCCGATGTAAATTAAAGAGTCGTGTGAACAAGGTTATTAAACCAGATGAAGGGGTTTTGTTTAAGGTGTCAAGGGTTCAGTCCGAGACTTATTCCTCTCATCTGACTGGCTGTTGATCAGGCGGTTTGTTGTAAAGCAGGTGAACAGTGATGTGTTGTCATTATGTGTACAGGGATTATTGTAAATCCCCAGACACACTGAAGCCCATCCTCTTTGTTCAGTATGGAAATTCATGCATTGATCTCTATCTGTGTgaattaaatattaaacataTTTGTGTGCTGAAAAAAggta

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU207437 lncRNA downstream 19731 8700109 ~ 8719900 (-) False G153137
TU207438 lncRNA downstream 19731 8700109 ~ 8719900 (-) True G153137
TU207435 lncRNA downstream 19731 8718193 ~ 8719900 (-) False G153137
TU207439 lncRNA downstream 19731 8718193 ~ 8719900 (-) False G153137
TU207433 lncRNA downstream 37843 8700109 ~ 8701788 (-) False G153137
TU207562 lncRNA upstream 127088 8895786 ~ 8898629 (-) False zgc:55558
TU207565 lncRNA upstream 127088 8895786 ~ 8903823 (-) False zgc:55558
TU207566 lncRNA upstream 127088 8895786 ~ 8903823 (-) False zgc:55558
TU207568 lncRNA upstream 127088 8895786 ~ 8903823 (-) False zgc:55558
TU207647 lncRNA upstream 292598 9061296 ~ 9111224 (-) True G153274
XM_039825208.1 mRNA downstream 73977 8660302 ~ 8665654 (-) True nudt9
XM_039825844.1 mRNA downstream 80412 8651632 ~ 8659219 (-) True si:ch211-11k18.4
XM_039824671.1 mRNA downstream 99196 8627083 ~ 8640435 (-) False rabep2
XM_039824670.1 mRNA downstream 99198 8627083 ~ 8640433 (-) True rabep2
XM_039823764.1 mRNA downstream 219046 8513629 ~ 8520585 (-) False LOC120573875
XM_039824549.1 mRNA upstream 4166 8772864 ~ 8778762 (-) True jpt2
XM_039824550.1 mRNA upstream 4166 8772864 ~ 8778757 (-) False jpt2
XM_039824551.1 mRNA upstream 30777 8799475 ~ 8805852 (-) True dhrs7b
XM_039824554.1 mRNA upstream 38536 8807234 ~ 8810350 (-) False tmem11
XM_039824553.1 mRNA upstream 38536 8807234 ~ 8810347 (-) True tmem11
TU207482 other downstream 6612 8731397 ~ 8733019 (-) True G153172
TU207167 other downstream 295250 8441179 ~ 8444381 (-) True G152952
XR_005641918.1 other downstream 639233 8082138 ~ 8100398 (-) False LOC120574885
TU206683 other downstream 2018988 6719784 ~ 6720643 (-) True G152567
TU206522 other downstream 2511517 6182408 ~ 6228114 (-) True G152441
TU207525 other upstream 43644 8812342 ~ 8816276 (-) False natd1
TU207545 other upstream 85062 8853760 ~ 8856957 (-) True tufm
TU207546 other upstream 85062 8853760 ~ 8857571 (-) False tufm
TU207547 other upstream 85062 8853760 ~ 8856957 (-) False tufm
TU207570 other upstream 127088 8895786 ~ 8904340 (-) False zgc:55558