Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_039826485.1 |
| length | 1172 |
| RNA type | mRNA |
| GC content | 0.48 |
| exon number | 4 |
| gene id | LOC120575655 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_053127.1 |
| NCBI id | CM020924.1 |
| chromosome length | 37730433 |
| location | 35968403 ~ 35971793 (+) |
| genome version | GENO_Pfluv_1.0_2020_eurasian_perch_Genome |
| species | eurasian perch (Perca fluviatilis) |
| id | description |
|---|---|
| ko04744 | Phototransduction |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU231959 | lncRNA | upstream | 247059 | 35721136 ~ 35721344 (+) | True | G171121 |
| TU231925 | lncRNA | upstream | 357223 | 35610898 ~ 35611180 (+) | True | G171088 |
| XR_005642039.1 | lncRNA | upstream | 409137 | 35558376 ~ 35559266 (+) | True | LOC120575670 |
| XR_005642030.1 | lncRNA | upstream | 434342 | 35529788 ~ 35534061 (+) | True | LOC120575663 |
| TU231877 | lncRNA | upstream | 465927 | 35497967 ~ 35502476 (+) | True | G171049 |
| TU232017 | lncRNA | downstream | 1455 | 35973248 ~ 35976436 (+) | True | G171171 |
| TU232020 | lncRNA | downstream | 15851 | 35987644 ~ 35990193 (+) | True | G171174 |
| TU232024 | lncRNA | downstream | 37640 | 36009433 ~ 36011192 (+) | True | G171177 |
| TU232044 | lncRNA | downstream | 107900 | 36079693 ~ 36079947 (+) | True | G171194 |
| TU232049 | lncRNA | downstream | 118424 | 36090217 ~ 36090515 (+) | True | G171199 |
| XM_039776757.1 | mRNA | upstream | 190778 | 35775979 ~ 35777625 (+) | True | LOC120543618 |
| XM_039776756.1 | mRNA | upstream | 265319 | 35700064 ~ 35703084 (+) | True | LOC120543616 |
| XM_039826476.1 | mRNA | upstream | 299931 | 35659716 ~ 35668472 (+) | True | LOC120575650 |
| XM_039826478.1 | mRNA | upstream | 299931 | 35663399 ~ 35668472 (+) | False | LOC120575650 |
| XM_039776755.1 | mRNA | upstream | 357817 | 35603863 ~ 35610586 (+) | True | LOC120543615 |
| XM_039826475.1 | mRNA | downstream | 345050 | 36316843 ~ 36325638 (+) | True | LOC120575649 |
| XM_039776763.1 | mRNA | downstream | 432621 | 36404414 ~ 36406390 (+) | True | LOC120543623 |
| XM_039826379.1 | mRNA | downstream | 1216016 | 37187809 ~ 37223409 (+) | True | LOC120575584 |
| XM_039776717.1 | mRNA | downstream | 1706808 | 37678601 ~ 37695632 (+) | False | LOC120543587 |
| XM_039776716.1 | mRNA | downstream | 1710138 | 37681931 ~ 37695632 (+) | False | LOC120543587 |
| unassigned_transcript_962 | other | upstream | 343791 | 35624541 ~ 35624612 (+) | True | trnaw-cca_23 |
| unassigned_transcript_961 | other | upstream | 344737 | 35623595 ~ 35623666 (+) | True | trnaw-cca_22 |
| unassigned_transcript_960 | other | upstream | 346629 | 35621703 ~ 35621774 (+) | True | trnaw-cca_21 |
| unassigned_transcript_959 | other | upstream | 347578 | 35620754 ~ 35620825 (+) | True | trnaw-cca_20 |
| unassigned_transcript_958 | other | upstream | 348533 | 35619799 ~ 35619870 (+) | True | trnaw-cca_19 |
| TU232287 | other | downstream | 1290123 | 37261916 ~ 37262336 (+) | True | G171409 |
| TU232385 | other | downstream | 1571807 | 37543600 ~ 37613796 (+) | False | G171468 |
| TU232389 | other | downstream | 1571807 | 37543600 ~ 37601804 (+) | True | G171468 |
| TU232416 | other | downstream | 1634237 | 37606030 ~ 37616661 (+) | True | G171483 |
| TU232382 | other | downstream | 1695428 | 37667221 ~ 37669599 (+) | False | G171468 |
