RNA id: XM_039779491.1


Basic Information

Item Value
RNA id XM_039779491.1
length 1188
RNA type mRNA
GC content 0.61
exon number 8
gene id fktn
representative True

Chromosome Information

Item Value
chromosome id NC_053128.1
NCBI id CM020925.1
chromosome length 37416781
location 34777854 ~ 34797178 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence

gaagaaggatgtTGTTTCCAAGATGGCTCCGGGTCTGGCTGCAGCAGCCGACTGCTCGCTATCTTCCCGCCGTTAAAAGATGCCAGCTCGGTGTTAATGTGACCAGAGAGCTCCGGGTCGTTACCGGGCGCTGTTACCGGAGGTTTGCGGATGCCTCGTGTGAACCGGACCGCCGTGTTATCTCTGCTGATCGTCAGCAGCTCCGCGTTCCTGCTGTTCCAGCTGTATTACTACCGGCAGTACGTCAGCAAGCTGCCGGGCCCTCACATCCTGAGCCAGACCGGTCACCTGACCGCCAGCGACTTCCAATGGCAAACGGTGAAGAAGTTTCTGGCGTTGGCTCAGCGCTTCGGGCTGCCGCTGTTCCTCGCCGACACCGCCGCACTGACGCTgctctcccatgatgctttgcggCAGCGCGACCGGCTGGTGCGTGAGCCACACTGCAGCTTCCTGTGCACCGGCCGGCCAATCACGTCGTTTGCTCTGCACGCCAACCTGTGGAAGTACgagCCCGGCTTCCTATTGGCCGCGGAGCAGAAAGGCTTCGAGCTGCTGGAGCTGCGTGGAGAAGACCCGCGATTGGCCAGTCTGGACACCCTATCAGGACAGGAGATCCCGCTGCACTTCCTGTTCCGCCTCCACGGCTACATCATTCATGTGGTGTTCCTGTACGAGCGCAGCGGGAACTATCTGTGGAGCGGAGCGTTGCGTCTCCGAGCCGACGCCGACCGAAGCTTTGCTCCGTTCAAACTGCTCGACTACGGTCGCCATGCTGGAGCGTACGACAGGCCGGAGTTGGTTCTGACGGTTCTGGACGGTCTCGATGTTCGGATCCCGCGAAACGTTTCCCGTTTCCTGTCCGAGCAGCGACACGCTCGCTTCCTGGAGTGCCGTTACCGTGACGCTCGCAACTTCCTGCAGATGTACCCTGACGACGCCTCTCCGGTTGCCGTGGAGTTTCGGAGGAAAGTGAAGTCGCTGCTTCATCTGGCGTCTCGAACCCTCGCTGCTCTCAACATCCCCTTCTGGCTCAGCAGCGGCACCTGCCTGGGCTGGTTCCGGCAGTGCAGCGTGATCTCGTACAGCCGCGACGTCGACATCGGCGTCTTCATCTCAGACTTCAGCTCTGACATCATCGGCGCCTTCAGGGACGCCGGACTCTCCCTCAAACACAAGTTTGGAAAG

Function

GO: NA

KEGG:

id description
K19872 FKTN; fukutin

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU244181 lncRNA upstream 4311 34750835 ~ 34773543 (+) True G180243
TU244182 lncRNA upstream 21801 34755637 ~ 34756053 (+) True G180244
TU244146 lncRNA upstream 40409 34736968 ~ 34737445 (+) True G180218
TU244153 lncRNA upstream 122182 34651754 ~ 34655672 (+) True G180224
TU244105 lncRNA upstream 150312 34620273 ~ 34627542 (+) False G180205
TU244136 lncRNA downstream 3429 34800607 ~ 34803591 (+) False G180213
TU244137 lncRNA downstream 3429 34800607 ~ 34803591 (+) False G180213
TU244139 lncRNA downstream 3429 34800607 ~ 34803591 (+) False G180213
TU244140 lncRNA downstream 3429 34800607 ~ 34803591 (+) True G180213
TU244185 lncRNA downstream 8847 34806025 ~ 34848183 (+) True G180246
XM_039779456.1 mRNA upstream 422498 34332321 ~ 34355356 (+) True wdr36
XM_039779485.1 mRNA upstream 448591 34318618 ~ 34329263 (+) True slc25a46
XM_039779572.1 mRNA upstream 469876 34300493 ~ 34307978 (+) True slc31a1
XM_039779571.1 mRNA upstream 469876 34302660 ~ 34307978 (+) False slc31a1
XM_039779453.1 mRNA upstream 731230 33997414 ~ 34046624 (+) False LOC120545262
XM_039779578.1 mRNA downstream 53423 34850601 ~ 34851604 (+) True si:ch211-202f5.2
XM_039779566.1 mRNA downstream 147797 34944975 ~ 34948439 (+) False LOC120545317
XM_039779455.1 mRNA downstream 189492 34986670 ~ 35023782 (+) True LOC120545265
XM_039779470.1 mRNA downstream 337293 35134471 ~ 35143485 (+) True LOC120545273
XM_039779469.1 mRNA downstream 407903 35205081 ~ 35232148 (+) True LOC120545272
TU244088 other upstream 211902 34564880 ~ 34565952 (+) True G180201
TU244084 other upstream 217469 34557582 ~ 34560385 (+) True G180199
TU244008 other upstream 449541 34318593 ~ 34328313 (+) False slc25a46
TU244006 other upstream 449541 34318648 ~ 34328313 (+) False slc25a46
TU243872 other upstream 938467 33838192 ~ 33839387 (+) True G180043
TU244144 other downstream 10080 34807258 ~ 34814910 (+) True G180216
TU244245 other downstream 155886 34953064 ~ 34955966 (+) True G180268
TU244390 other downstream 1053744 35850922 ~ 36018072 (+) False G180366
TU244424 other downstream 1172588 35969766 ~ 35973061 (+) True G180382
TU244438 other downstream 1261128 36058306 ~ 36058736 (+) False LOC120545305

Expression Profile