RNA id: TU244008


Basic Information

Item Value
RNA id TU244008
length 886
RNA type TUCP
GC content 0.61
exon number 8
gene id slc25a46
representative False

Chromosome Information

Item Value
chromosome id NC_053128.1
NCBI id CM020925.1
chromosome length 37416781
location 34318593 ~ 34329263 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence

GTAGGGGGCGGTAATTAGCTGTAACACCGCCAAGCTGCCGGAAGAAGAGCAGAAGAAGAACAACATCCGGGTGACAGGTGGATGTTGTTTAGCTGTGGGTCAAATATTCCTCCTTTAACTTATTCATCCCGTTATTCTCCCGGGACGTGTTGACGTCGGTTTACCCCGGTCCCCCCGCAGTCTGCCCCGCAGCGACCCTCCGATGGCCTCCCGGCGGCCGGACAGCTTCGATGGGCTCGGGTACCGCGGCCGCGACGACCCGCTGTACGGAGCCTCCTACCCGGTCAGAAGCGCTGGAGGCCCCGCGGAGCTGCAGCACCACCACTGGGTCACCAGCCCTCCGGACATCCCGGGCAGCCGCAACCTGCACCACACAGACCGGACACCGCAGCTCGAAGAGCCGCTGGGGGGTCCCGGAGGTCCCGCTGCCGCCTGGGAGGCTCCACAGCCCGGCGGACCGCCCGCTGaGCAGCTGAATCGATTTGCAGGATTTGGAATCGGACTCGTCAGtcTGTTCACCGAGAACGTCCTCGCTCACCCCTGCATCGTCTTCCGCAGACAGTGTCAGgtgaaCTTCCACGGAGGCTGTTACCACCTGACTCCGTTCAGCGCCGTCGCCGTGATGTACTCCATCTCCAAGGCTCAGggggtgAAGTCTCAGTGGAAGGGGATGGGCAGCACCTTCATCGTTCACGGCATCACGCTCGGAGCCGAGGGGGTCATCAGCGAGTTCACGCCGTTACCACGggagcTTCCTCACAGGTGGAGTCTGAAACAGCTGGCAGGACATTTACTGCTCAAAGGgttaACAGCTGTGGTGGCTCTTCCTTTTTACTGTGCCAGCCTCATTGAGACCGTCCAGAGTGAGATAGTGCTAGACGAAACC

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU244039 lncRNA upstream 7314 34310611 ~ 34311279 (+) True G180163
TU244017 lncRNA upstream 9799 34282844 ~ 34308794 (+) False slc31a1
TU244036 lncRNA upstream 22046 34294914 ~ 34296547 (+) True G180160
TU244035 lncRNA upstream 56415 34258173 ~ 34262178 (+) True G180159
XR_005636676.1 lncRNA upstream 107108 34209549 ~ 34211485 (+) True LOC120545350
TU244045 lncRNA downstream 14980 34343293 ~ 34346498 (+) False G180166
TU244046 lncRNA downstream 14980 34343293 ~ 34348784 (+) True G180166
TU244048 lncRNA downstream 14980 34343293 ~ 34348784 (+) False G180166
TU244047 lncRNA downstream 18023 34346336 ~ 34348784 (+) False G180166
TU244042 lncRNA downstream 19873 34348186 ~ 34348784 (+) False G180166
XM_039779572.1 mRNA upstream 10615 34300493 ~ 34307978 (+) True slc31a1
XM_039779571.1 mRNA upstream 10615 34302660 ~ 34307978 (+) False slc31a1
XM_039779452.1 mRNA upstream 271969 33997411 ~ 34046624 (+) True LOC120545262
XM_039779453.1 mRNA upstream 271969 33997414 ~ 34046624 (+) False LOC120545262
XM_039779451.1 mRNA upstream 369342 33936243 ~ 33949251 (+) True LOC120545261
XM_039779456.1 mRNA downstream 4008 34332321 ~ 34355356 (+) True wdr36
XM_039779567.1 mRNA downstream 243506 34571819 ~ 34948439 (+) True LOC120545317
XM_039779491.1 mRNA downstream 449541 34777854 ~ 34797178 (+) True fktn
XM_039779578.1 mRNA downstream 522288 34850601 ~ 34851604 (+) True si:ch211-202f5.2
XM_039779566.1 mRNA downstream 616662 34944975 ~ 34948439 (+) False LOC120545317
TU243872 other upstream 479206 33838192 ~ 33839387 (+) True G180043
TU243867 other upstream 493255 33824342 ~ 33825338 (+) False G180040
TU243868 other upstream 493255 33824342 ~ 33825338 (+) True G180040
XR_005636627.1 other upstream 574065 33708727 ~ 33744528 (+) False dmtn
TU243808 other upstream 994528 33270996 ~ 33324065 (+) True G179997
TU244084 other downstream 229269 34557582 ~ 34560385 (+) True G180199
TU244088 other downstream 236567 34564880 ~ 34565952 (+) True G180201
TU244135 other downstream 387973 34716286 ~ 34803591 (+) False G180213
TU244144 other downstream 478945 34807258 ~ 34814910 (+) True G180216
TU244245 other downstream 624751 34953064 ~ 34955966 (+) True G180268

Expression Profile