RNA id: TU244047


Basic Information

Item Value
RNA id TU244047
length 225
lncRNA type sense_over
GC content 0.52
exon number 2
gene id G180166
representative False

Chromosome Information

Item Value
chromosome id NC_053128.1
NCBI id CM020925.1
chromosome length 37416781
location 34343293 ~ 34348784 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence

cctgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgggtgtgtgtgtgtgtgtgtgtgtgtctgtgtgtgtgtgtctgtgtgtgtctgtgtgtgtgtgtctctgtgtgtccgtgtgtgtgtctgtgtgtgtgtgtctgtgtgtccccgtgtgtgtgtctgtgtgtgtgtgtgtgtgtgtgtgtccgt

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU244039 lncRNA upstream 35057 34310611 ~ 34311279 (+) True G180163
TU244017 lncRNA upstream 37542 34282844 ~ 34308794 (+) False slc31a1
TU244036 lncRNA upstream 49789 34294914 ~ 34296547 (+) True G180160
TU244035 lncRNA upstream 84158 34258173 ~ 34262178 (+) True G180159
XR_005636676.1 lncRNA upstream 134851 34209549 ~ 34211485 (+) True LOC120545350
TU244057 lncRNA downstream 122625 34471409 ~ 34473459 (+) True G180174
TU244077 lncRNA downstream 164962 34513746 ~ 34540775 (+) True G180194
TU244081 lncRNA downstream 193873 34542657 ~ 34544486 (+) True G180197
TU244082 lncRNA downstream 196542 34545326 ~ 34548922 (+) True G180198
TU244098 lncRNA downstream 224757 34573541 ~ 34611303 (+) True G180203
XM_039779485.1 mRNA upstream 17073 34318618 ~ 34329263 (+) True slc25a46
XM_039779572.1 mRNA upstream 38358 34300493 ~ 34307978 (+) True slc31a1
XM_039779571.1 mRNA upstream 38358 34302660 ~ 34307978 (+) False slc31a1
XM_039779452.1 mRNA upstream 299712 33997411 ~ 34046624 (+) True LOC120545262
XM_039779567.1 mRNA downstream 223035 34571819 ~ 34948439 (+) True LOC120545317
XM_039779491.1 mRNA downstream 429070 34777854 ~ 34797178 (+) True fktn
XM_039779578.1 mRNA downstream 501817 34850601 ~ 34851604 (+) True si:ch211-202f5.2
XM_039779566.1 mRNA downstream 596191 34944975 ~ 34948439 (+) False LOC120545317
XM_039779455.1 mRNA downstream 637886 34986670 ~ 35023782 (+) True LOC120545265
TU244008 other upstream 18023 34318593 ~ 34328313 (+) False slc25a46
TU244006 other upstream 18023 34318648 ~ 34328313 (+) False slc25a46
TU243872 other upstream 506949 33838192 ~ 33839387 (+) True G180043
TU243867 other upstream 520998 33824342 ~ 33825338 (+) False G180040
TU244084 other downstream 208798 34557582 ~ 34560385 (+) True G180199
TU244088 other downstream 216096 34564880 ~ 34565952 (+) True G180201
TU244135 other downstream 367502 34716286 ~ 34803591 (+) False G180213
TU244144 other downstream 458474 34807258 ~ 34814910 (+) True G180216
TU244245 other downstream 604280 34953064 ~ 34955966 (+) True G180268

Expression Profile