RNA id: TU244077


Basic Information

Item Value
RNA id TU244077
length 523
lncRNA type inter_gene
GC content 0.40
exon number 2
gene id G180194
representative True

Chromosome Information

Item Value
chromosome id NC_053128.1
NCBI id CM020925.1
chromosome length 37416781
location 34513746 ~ 34540775 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence

ACTGGTTGGGTCATTCTGAGCTTAGCAACGGTTGCTATGTTCTGCTGCTGTTGGCTGACCTACTctgcttgctagctagctaatatgCTAGCTCCTCGGTTAGAGTTTAACTTCAGCTCaaaatatttcttaaaaaaagggttagggttaggggttagttTTAAAGTAATAACATAAAATACTTCAAAATGTCAGCAGAGTTACTAGTCACTCTCTCTGTAGGAACAGGGGTCTAGATCTGAGGTGTTATCTTGTTCATCCTGATGGGGCAGTAGACAGTCGGGGGTTTCTTTCAGTTGTTCAGAAagtattttcttgtttttctttgtgttttttttcctcctcctgatgtttcttttcttcctcaAGGTGTAGTTGAGTTTTCAGTCTAGATATTTGGGAGTTTGTCTCATTTTCGAAAactaaaaagtaacaaaaaaaggaaataaatcaGGAGCTAATTTTGAAGCAGCTGCTTCTCAGGgaacacctctctctctctctctctctctgtctctctctc

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU244057 lncRNA upstream 40287 34471409 ~ 34473459 (+) True G180174
TU244046 lncRNA upstream 164962 34343293 ~ 34348784 (+) True G180166
TU244048 lncRNA upstream 164962 34343293 ~ 34348784 (+) False G180166
TU244047 lncRNA upstream 164962 34346336 ~ 34348784 (+) False G180166
TU244042 lncRNA upstream 164962 34348186 ~ 34348784 (+) False G180166
TU244081 lncRNA downstream 1882 34542657 ~ 34544486 (+) True G180197
TU244082 lncRNA downstream 4551 34545326 ~ 34548922 (+) True G180198
TU244098 lncRNA downstream 32766 34573541 ~ 34611303 (+) True G180203
TU244091 lncRNA downstream 37921 34578696 ~ 34595075 (+) True G180202
TU244093 lncRNA downstream 38218 34578993 ~ 34610811 (+) False G180202
XM_039779456.1 mRNA upstream 158390 34332321 ~ 34355356 (+) True wdr36
XM_039779485.1 mRNA upstream 184483 34318618 ~ 34329263 (+) True slc25a46
XM_039779572.1 mRNA upstream 205768 34300493 ~ 34307978 (+) True slc31a1
XM_039779571.1 mRNA upstream 205768 34302660 ~ 34307978 (+) False slc31a1
XM_039779453.1 mRNA upstream 467122 33997414 ~ 34046624 (+) False LOC120545262
XM_039779567.1 mRNA downstream 31044 34571819 ~ 34948439 (+) True LOC120545317
XM_039779491.1 mRNA downstream 237079 34777854 ~ 34797178 (+) True fktn
XM_039779578.1 mRNA downstream 309826 34850601 ~ 34851604 (+) True si:ch211-202f5.2
XM_039779566.1 mRNA downstream 404200 34944975 ~ 34948439 (+) False LOC120545317
XM_039779455.1 mRNA downstream 445895 34986670 ~ 35023782 (+) True LOC120545265
TU244008 other upstream 185433 34318593 ~ 34328313 (+) False slc25a46
TU244006 other upstream 185433 34318648 ~ 34328313 (+) False slc25a46
TU243872 other upstream 674359 33838192 ~ 33839387 (+) True G180043
TU243867 other upstream 688408 33824342 ~ 33825338 (+) False G180040
TU244084 other downstream 16807 34557582 ~ 34560385 (+) True G180199
TU244088 other downstream 24105 34564880 ~ 34565952 (+) True G180201
TU244135 other downstream 175511 34716286 ~ 34803591 (+) False G180213
TU244144 other downstream 266483 34807258 ~ 34814910 (+) True G180216
TU244245 other downstream 412289 34953064 ~ 34955966 (+) True G180268

Expression Profile