Gene
RNA
| Item | Value |
|---|---|
| RNA id | TCONS_00071223 |
| length | 852 |
| lncRNA type | retained_intron |
| GC content | 0.35 |
| exon number | 2 |
| gene id | XLOC_036440 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_007119.7 |
| NCBI id | CM002892.2 |
| chromosome length | 54304671 |
| location | 23781028 ~ 23783633 (-) |
| genome version | GRCz11_2017_zebrafish_Genome |
| species | zebrafish (Danio rerio) |
| id | name | namespace |
|---|---|---|
| GO:0005856 | cytoskeleton | cellular_component |
| GO:0005737 | cytoplasm | cellular_component |
| id | description |
|---|---|
| ZDB-GENE-081105-176 | Predicted to be located in cytoplasm and cytoskeleton. Orthologous to human C1orf194 (chromosome 1 open reading frame 194). |
| ensembl_id | ENSDART00000141879 |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TCONS_00072456 | lncRNA | downstream | 76756 | 23688651 ~ 23705867 (-) | False | XLOC_036437 |
| TCONS_00071211 | lncRNA | downstream | 198412 | 23581510 ~ 23584211 (-) | False | XLOC_036436 |
| TCONS_00071212 | lncRNA | downstream | 198768 | 23581510 ~ 23583855 (-) | False | XLOC_036436 |
| TCONS_00072455 | lncRNA | downstream | 224701 | 23554027 ~ 23557922 (-) | True | XLOC_036434 |
| TCONS_00071206 | lncRNA | downstream | 392381 | 23387884 ~ 23390242 (-) | True | XLOC_036432 |
| TCONS_00072043 | lncRNA | upstream | 409102 | 24192699 ~ 24215822 (-) | True | XLOC_036444 |
| TCONS_00072457 | lncRNA | upstream | 513774 | 24297371 ~ 24297670 (-) | True | XLOC_036446 |
| TCONS_00072458 | lncRNA | upstream | 541651 | 24325248 ~ 24577568 (-) | True | XLOC_036447 |
| TCONS_00072459 | lncRNA | upstream | 636353 | 24419950 ~ 24497994 (-) | True | XLOC_036450 |
| TCONS_00072460 | lncRNA | upstream | 657931 | 24441528 ~ 24475095 (-) | True | XLOC_036452 |
| TCONS_00071220 | mRNA | downstream | 2221 | 23776570 ~ 23780402 (-) | False | XLOC_036439 |
| TCONS_00071221 | mRNA | downstream | 2289 | 23776778 ~ 23780334 (-) | True | XLOC_036439 |
| TCONS_00071218 | mRNA | downstream | 6224 | 23753898 ~ 23776399 (-) | False | XLOC_036438 |
| TCONS_00071219 | mRNA | downstream | 17416 | 23760499 ~ 23765207 (-) | True | XLOC_036438 |
| TCONS_00071217 | mRNA | downstream | 24311 | 23753273 ~ 23758312 (-) | False | XLOC_036438 |
| TCONS_00071224 | mRNA | upstream | 93331 | 23876928 ~ 23885016 (-) | False | XLOC_036441 |
| TCONS_00071225 | mRNA | upstream | 98314 | 23881911 ~ 23884312 (-) | True | XLOC_036441 |
| TCONS_00071226 | mRNA | upstream | 323433 | 24107030 ~ 24113604 (-) | False | XLOC_036442 |
| TCONS_00071227 | mRNA | upstream | 324862 | 24108459 ~ 24113575 (-) | True | XLOC_036442 |
| TCONS_00071228 | mRNA | upstream | 338901 | 24122498 ~ 24135171 (-) | True | XLOC_036443 |
| TCONS_00071202 | other | downstream | 659749 | 23122762 ~ 23122874 (-) | True | XLOC_036425 |
| TCONS_00071201 | other | downstream | 660251 | 23122151 ~ 23122372 (-) | False | XLOC_036425 |
| TCONS_00071194 | other | downstream | 936825 | 22844700 ~ 22845798 (-) | True | XLOC_036420 |
| TCONS_00071192 | other | downstream | 999401 | 22766456 ~ 22783222 (-) | False | XLOC_036419 |
| TCONS_00071180 | other | downstream | 1243673 | 22536028 ~ 22538950 (-) | True | XLOC_036416 |
| TCONS_00071249 | other | upstream | 1259604 | 25043201 ~ 25044808 (-) | True | XLOC_036463 |
| TCONS_00071268 | other | upstream | 1866632 | 25650229 ~ 25665761 (-) | False | XLOC_036471 |
| TCONS_00071278 | other | upstream | 1968528 | 25752125 ~ 25755298 (-) | False | XLOC_036475 |
| TCONS_00071280 | other | upstream | 1973085 | 25756682 ~ 25761038 (-) | False | XLOC_036475 |
| TCONS_00071284 | other | upstream | 2035025 | 25818622 ~ 25846188 (-) | False | XLOC_036477 |
