RNA id: TCONS_00071730


Basic Information

Item Value
RNA id TCONS_00071730
length 852
RNA type mRNA
GC content 0.45
exon number 5
gene id XLOC_036737
representative False

Chromosome Information

Item Value
chromosome id NC_007119.7
NCBI id CM002892.2
chromosome length 54304671
location 48673596 ~ 48675775 (-)
genome version GRCz11_2017_zebrafish_Genome
species zebrafish
(Danio rerio)

Sequence

TTTGTTTCATTGATTGTTTTTACAGGTAACATCTACAAGGAATATCAAGTGGATAATGTTATAGGTCAAGGAACATTTGGAGTGGTCTCTGCTGGAGTTCGTCTGTCTGATTCACGAAAGGTGGCAATCAAATATGTGAGCAAGAGTCATACAAGAAGAACCATGACGATTCTATCATCACAGAAGACTGTTCCACAAGAAGTCGGCTTGATGTATTTGATAAGCAGAGGTCCTTACGTTCCTCAAATAATACAACCGCTGGATTGGTTTGAGTCACGAACCCAATACGTACTGGTGGTAGAGCGTCCCGAACCATGTATGGACCTGGACAGGTTTGTAATGCAGCATGGTTGGAAAATCAGCGAATCCCAAACACGAGTGGTGATACGCCAGGTGGCCACTGCTGCAAAAGTATGCTGTGAAAGGGGAGTCTACCACAGCGACATCAAGATGGAAAACCTGCTCATCAACCCCCACACCTTGCAGGTCAAACTCATCGACTTTGGTGCTGGAAGTGTCGTGACCAAAAAGGGCTACACAACATTCCGTGgtACAAGAGTTTATGCTCCTCCGGAATTTGACAAATGTGGCAGGATGCATGCCAAGACTGCAACGGTGTACTCTATAGGAGTACTGTTGTTCAAGCTGCTTTGTGGACATTTCCCTAAAAAAGAGCTCAGTAGGATTGCCACCAGAACCTGGCAGCATGACGACCTATCCAAAGAATGCATCGACCTGATCTGTTCGTGTTTGGAAAGTGATCCAACCAAGCGGATTCCACTTGAAAAGATCCTCCTCCATAACTGGTTCCAGGTTTTGATCCTGAAGCCAAGCAACAGAAGAAACGATTAA

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDART00000060785

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TCONS_00071726 lncRNA downstream 6424 48661151 ~ 48668082 (-) False XLOC_036736
TCONS_00072529 lncRNA downstream 126414 48546053 ~ 48548092 (-) True XLOC_036735
TCONS_00072087 lncRNA downstream 505170 48168900 ~ 48169336 (-) True XLOC_036734
TCONS_00072528 lncRNA downstream 515753 48092795 ~ 48158753 (-) False XLOC_036733
TCONS_00072088 lncRNA upstream 119683 48795458 ~ 48798032 (-) True XLOC_036743
TCONS_00072530 lncRNA upstream 367969 49043744 ~ 49065039 (-) True XLOC_036745
TCONS_00071776 lncRNA upstream 1070457 49746232 ~ 49749612 (-) False XLOC_036760
TCONS_00071777 lncRNA upstream 1072636 49748411 ~ 49749381 (-) False XLOC_036760
TCONS_00071778 lncRNA upstream 1076491 49752266 ~ 49755968 (-) False XLOC_036760
TCONS_00071725 mRNA downstream 6395 48629495 ~ 48668111 (-) False XLOC_036736
TCONS_00071723 mRNA downstream 830050 47829361 ~ 47844456 (-) True XLOC_036732
TCONS_00071720 mRNA downstream 856224 47775231 ~ 47818282 (-) False XLOC_036731
TCONS_00071719 mRNA downstream 873752 47775008 ~ 47800754 (-) False XLOC_036731
TCONS_00071732 mRNA upstream 27230 48703005 ~ 48704050 (-) False XLOC_036738
TCONS_00071733 mRNA upstream 27545 48703320 ~ 48704311 (-) False XLOC_036738
TCONS_00071734 mRNA upstream 27587 48703362 ~ 48704688 (-) True XLOC_036738
TCONS_00071735 mRNA upstream 64215 48739990 ~ 48740953 (-) False XLOC_036739
TCONS_00071736 mRNA upstream 64448 48740223 ~ 48741106 (-) True XLOC_036739
TCONS_00071727 other downstream 5379 48667290 ~ 48669127 (-) True XLOC_036736
TCONS_00071722 other downstream 851188 47810764 ~ 47823318 (-) True XLOC_036731
TCONS_00071716 other downstream 1168505 47505885 ~ 47506001 (-) True XLOC_036730
TCONS_00071714 other downstream 1399096 47275296 ~ 47275410 (-) True XLOC_036727
TCONS_00071682 other downstream 2777680 45883765 ~ 45896826 (-) True XLOC_036705
TCONS_00071741 other upstream 103186 48778961 ~ 48790587 (-) True XLOC_036742
TCONS_00071743 other upstream 474129 49149904 ~ 49152475 (-) True XLOC_036746
TCONS_00071744 other upstream 493993 49169768 ~ 49172500 (-) False XLOC_036747
TCONS_00071775 other upstream 1070457 49746232 ~ 49755899 (-) False XLOC_036760
TCONS_00071797 other upstream 1842007 50517782 ~ 50517903 (-) True XLOC_036773

Expression Profile

//