Gene
RNA
| Item | Value |
|---|---|
| RNA id | TCONS_00073861 |
| length | 1182 |
| RNA type | mRNA |
| GC content | 0.51 |
| exon number | 5 |
| gene id | XLOC_037608 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_007120.7 |
| NCBI id | CM002893.2 |
| chromosome length | 56459846 |
| location | 5776359 ~ 5805229 (-) |
| genome version | GRCz11_2017_zebrafish_Genome |
| species | zebrafish (Danio rerio) |
| id | description |
|---|---|
| ko04020 | Calcium signaling pathway |
| ko04080 | Neuroactive ligand-receptor interaction |
| ko04971 | Gastric acid secretion |
| ko04030 | G protein-coupled receptors |
| ensembl_id | ENSDART00000185675 |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TCONS_00075290 | lncRNA | downstream | 730370 | 5044975 ~ 5045989 (-) | True | XLOC_037603 |
| TCONS_00073852 | lncRNA | downstream | 732271 | 5043087 ~ 5044088 (-) | False | XLOC_037603 |
| TCONS_00075289 | lncRNA | downstream | 908920 | 4866100 ~ 4867439 (-) | True | XLOC_037602 |
| TCONS_00075288 | lncRNA | downstream | 1234538 | 4539475 ~ 4541821 (-) | False | XLOC_037600 |
| TCONS_00073839 | lncRNA | downstream | 1824533 | 3931723 ~ 3951826 (-) | True | XLOC_037596 |
| TCONS_00073869 | lncRNA | upstream | 609555 | 6414784 ~ 6502093 (-) | True | XLOC_037612 |
| TCONS_00074961 | lncRNA | upstream | 726320 | 6531549 ~ 6548796 (-) | True | XLOC_037614 |
| TCONS_00073887 | lncRNA | upstream | 1552590 | 7357819 ~ 7359484 (-) | True | XLOC_037626 |
| TCONS_00075291 | lncRNA | upstream | 1694031 | 7499260 ~ 7505531 (-) | True | XLOC_037631 |
| TCONS_00075292 | lncRNA | upstream | 2136540 | 7941769 ~ 7942597 (-) | True | XLOC_037636 |
| TCONS_00073858 | mRNA | downstream | 425342 | 5345236 ~ 5351017 (-) | True | XLOC_037607 |
| TCONS_00073857 | mRNA | downstream | 438436 | 5326861 ~ 5337923 (-) | True | XLOC_037606 |
| TCONS_00073856 | mRNA | downstream | 438663 | 5326861 ~ 5337696 (-) | False | XLOC_037606 |
| TCONS_00073855 | mRNA | downstream | 438844 | 5325015 ~ 5337515 (-) | False | XLOC_037606 |
| TCONS_00073854 | mRNA | downstream | 457486 | 5271524 ~ 5318873 (-) | True | XLOC_037605 |
| TCONS_00073862 | mRNA | upstream | 88379 | 5893608 ~ 5916755 (-) | False | XLOC_037609 |
| TCONS_00073863 | mRNA | upstream | 93430 | 5898659 ~ 5916693 (-) | True | XLOC_037609 |
| TCONS_00073864 | mRNA | upstream | 313133 | 6118362 ~ 6208067 (-) | True | XLOC_037610 |
| TCONS_00073865 | mRNA | upstream | 566690 | 6371919 ~ 6372535 (-) | False | XLOC_037611 |
| TCONS_00073866 | mRNA | upstream | 566697 | 6371926 ~ 6380653 (-) | True | XLOC_037611 |
| TCONS_00073841 | other | downstream | 1329255 | 4443918 ~ 4447104 (-) | True | XLOC_037598 |
| TCONS_00073830 | other | downstream | 2256648 | 3508318 ~ 3519711 (-) | True | XLOC_037592 |
| TCONS_00073827 | other | downstream | 2279780 | 3490831 ~ 3496579 (-) | True | XLOC_037591 |
| TCONS_00073809 | other | downstream | 3439056 | 2330861 ~ 2337303 (-) | True | XLOC_037575 |
| TCONS_00073808 | other | downstream | 3498867 | 2226463 ~ 2277492 (-) | False | XLOC_037574 |
| TCONS_00073868 | other | upstream | 603928 | 6409157 ~ 6409271 (-) | True | XLOC_037613 |
| TCONS_00073875 | other | upstream | 912448 | 6717677 ~ 6717801 (-) | True | XLOC_037618 |
| TCONS_00073897 | other | upstream | 1717206 | 7522435 ~ 7539023 (-) | True | XLOC_037632 |
| TCONS_00073901 | other | upstream | 1836531 | 7641760 ~ 7655301 (-) | True | XLOC_037633 |
| TCONS_00073935 | other | upstream | 3938330 | 9743559 ~ 9805319 (-) | False | XLOC_037657 |
| species | RNA id | representative | length | rna type | GC content | exon number | chromosome id | location |
|---|---|---|---|---|---|---|---|---|
| grasscarp (Ctenopharyngodon idella) | CI01000037_02755842_02769590.mRNA | True | 2745 | mRNA | 0.44 | 4 | CI01000037 | 2755842 ~ 2771166 (+) |
| bowfin (Amia calva) | AMCG00014350 | True | 7597 | mRNA | 0.37 | 5 | CM030128.1 | 10352845 ~ 10380421 (+) |
