RNA id: TU71566



Basic Information


Item Value
RNA id TU71566
length 720
RNA type TUCP
GC content 0.53
exon number 4
gene id hyal3
representative False

Chromosome Information


Item Value
chromosome id NC_053116.1
NCBI id CM020913.1
chromosome length 44101041
location 27189048 ~ 27199911 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence


CTTGTGTGATCAGATCAAATCTACACAGGACGCTGCCACAGCGAGACCAAAAAGCAAAATGACCAGCTGTACTGGCTCTGGCGTCAATCCACTGCTCTCTATCCCAGCGTCTACCTGCCACAAAGGCTGGCAGGATCCACGGATGCAGCTCTGATGGTCAGACACAGACTGCTGGAGGCTTTGAGGGTGGCGTCTGTTTggcaccatggcaacaacaccAATCATGCTACTCCAGTTCTTCCCTATGCCAGgctagcattcacacacactctcactttTCTTAATAAGACCTGATGCACACATTGGGGGAGAGTGCGGCGCTGGGAGCTGCTGGAGTGGTGCTGTGGGGAGAGCTGAAATTTGCCAAATCCAAGCATCAGTGCATCCTTCTCAGAGACTACATACACACTGTCTTGGGTCCCTTGGTCCAATCGCTGAGGTCTGGCACAAAGCGCTGCAGCCTCCAACTTTGCCACGGCAATGGACGCTGCGCCAGGCGACGCCCCAGCTCTAGTTCCATGGTCTCCTCAGGTCCCgctgtgacctctgaccctgaTGAAGTCAACCTCCTCACTGATCCCTCAAGTGGAAAACCTTTTCACGACCACTTCCTGTGTCAGTGCTACCCGGGCTGGACTGGGCAGGAGTGTCAAGTGAAGAAGAAGGACGAAAACAGACCCAAACGTTTCTATCAAGGTGTCGCCAGTAATGTAAAGTAGt

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
XR_005639307.1 lncRNA downstream 370506 26817017 ~ 26818570 (-) True LOC120559521
TU71413 lncRNA downstream 370786 26817180 ~ 26818290 (-) False LOC120559521
XR_005639378.1 lncRNA downstream 387922 26797405 ~ 26801154 (-) True LOC120559916
TU71393 lncRNA downstream 391869 26796491 ~ 26797207 (-) True G53398
TU71390 lncRNA downstream 436037 26750010 ~ 26753039 (-) True G53395
XR_005639210.1 lncRNA upstream 23335 27213532 ~ 27215246 (-) True LOC120558995
TU71568 lncRNA upstream 23335 27213532 ~ 27214435 (-) False LOC120558995
TU71570 lncRNA upstream 63411 27253608 ~ 27255158 (-) True G53540
XR_005639209.1 lncRNA upstream 112195 27302392 ~ 27305560 (-) True LOC120558937
XR_005639208.1 lncRNA upstream 112195 27302392 ~ 27304533 (-) False LOC120558937
XM_039800091.1 mRNA downstream 5920 27171673 ~ 27183156 (-) True amt
XM_039800446.1 mRNA downstream 17844 27157588 ~ 27171232 (-) True ifrd2
XM_039799234.1 mRNA downstream 32089 27146503 ~ 27156987 (-) True zgc:136971
XM_039799235.1 mRNA downstream 32182 27146503 ~ 27156894 (-) False zgc:136971
XM_039799232.1 mRNA downstream 32199 27146503 ~ 27156877 (-) False zgc:136971
XM_039800447.1 mRNA upstream 3085 27193282 ~ 27202420 (-) True LOC120559022
XM_039800416.1 mRNA upstream 11774 27201971 ~ 27250394 (-) False prkar2aa
XM_039800414.1 mRNA upstream 11774 27201971 ~ 27250394 (-) False prkar2aa
XM_039800415.1 mRNA upstream 11774 27201971 ~ 27250394 (-) True prkar2aa
XM_039800418.1 mRNA upstream 11774 27201971 ~ 27249149 (-) False prkar2aa
TU71557 other downstream 17909 27163286 ~ 27171167 (-) False ifrd2
TU71558 other downstream 17909 27163286 ~ 27171167 (-) False ifrd2
TU71453 other downstream 223053 26961347 ~ 26966023 (-) True G53444
TU71391 other downstream 394048 26792452 ~ 26795028 (-) True selenok
XR_005639355.1 other downstream 530755 26646814 ~ 26658321 (-) False dcp1a
XR_005639389.1 other upstream 8515 27198712 ~ 27198827 (-) True LOC120559934
XR_005639350.1 other upstream 454586 27644783 ~ 27660646 (-) False xpc
XR_005639094.1 other upstream 2285812 29476009 ~ 29492973 (-) False clcnk
TU72353 other upstream 2570877 29761074 ~ 29765873 (-) False cdk11b
TU72358 other upstream 2570877 29761074 ~ 29765193 (-) False cdk11b

Expression Profile