Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU255395 |
| length | 240 |
| lncRNA type | intronic |
| GC content | 0.49 |
| exon number | 1 |
| gene id | G215596 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047607.1 |
| NCBI id | CM018553.1 |
| chromosome length | 26458119 |
| location | 23009071 ~ 23009310 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU255393 | lncRNA | downstream | 2274 | 23006594 ~ 23006797 (-) | True | G215594 |
| TU255388 | lncRNA | downstream | 9605 | 22999221 ~ 22999466 (-) | True | G215589 |
| TU255367 | lncRNA | downstream | 46915 | 22961940 ~ 22962156 (-) | True | G215568 |
| TU255289 | lncRNA | downstream | 182830 | 22822720 ~ 22826241 (-) | True | G215491 |
| TU255286 | lncRNA | downstream | 193819 | 22808399 ~ 22815252 (-) | True | G215489 |
| TU255405 | lncRNA | upstream | 49303 | 23058613 ~ 23058821 (-) | True | G215606 |
| TU255407 | lncRNA | upstream | 56257 | 23065567 ~ 23065801 (-) | True | G215608 |
| TU255439 | lncRNA | upstream | 125609 | 23134919 ~ 23143859 (-) | True | G215624 |
| TU255580 | lncRNA | upstream | 303585 | 23312895 ~ 23315021 (-) | False | fam193b |
| TU255584 | lncRNA | upstream | 319034 | 23328344 ~ 23328571 (-) | True | G215751 |
| XM_026947036.2 | mRNA | downstream | 230003 | 22769639 ~ 22779068 (-) | True | cltb |
| XM_026947037.2 | mRNA | downstream | 230010 | 22769639 ~ 22779061 (-) | False | cltb |
| XM_026947038.2 | mRNA | downstream | 230014 | 22769639 ~ 22779057 (-) | False | cltb |
| XM_034310258.1 | mRNA | downstream | 245200 | 22755981 ~ 22763871 (-) | True | faf2 |
| XM_034309816.1 | mRNA | downstream | 279218 | 22706554 ~ 22729853 (-) | True | cdhr2 |
| XM_026947066.2 | mRNA | upstream | 276398 | 23285708 ~ 23297814 (-) | False | dok3 |
| XM_026947065.2 | mRNA | upstream | 276398 | 23285708 ~ 23294554 (-) | True | dok3 |
| XM_026947064.2 | mRNA | upstream | 276398 | 23285708 ~ 23294551 (-) | False | dok3 |
| XM_026947063.2 | mRNA | upstream | 288639 | 23297949 ~ 23309411 (-) | True | LOC113546952 |
| XM_026947094.2 | mRNA | upstream | 303576 | 23312886 ~ 23327942 (-) | False | fam193b |
| TU255280 | other | downstream | 230252 | 22769637 ~ 22778819 (-) | False | cltb |
| TU255282 | other | downstream | 304592 | 22698413 ~ 22704479 (-) | False | smim13 |
| XR_004579404.1 | other | downstream | 589161 | 22409234 ~ 22419910 (-) | False | LOC117598969 |
| XR_004579403.1 | other | downstream | 589161 | 22413667 ~ 22419910 (-) | True | LOC117598969 |
| TU255018 | other | downstream | 644806 | 22339042 ~ 22364265 (-) | False | LOC117598814 |
| TU255434 | other | upstream | 127616 | 23136926 ~ 23156666 (-) | False | G215624 |
| TU255581 | other | upstream | 315175 | 23324485 ~ 23327870 (-) | False | fam193b |
| TU256261 | other | upstream | 1531525 | 24540835 ~ 24588450 (-) | False | usp7 |
| trnad-guc_6 | other | upstream | 1855337 | 24864647 ~ 24864718 (-) | True | trnad-guc_6 |
| trnap-agg_10 | other | upstream | 2674830 | 25684140 ~ 25684211 (-) | True | trnap-agg_10 |
