Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU1609 |
| length | 201 |
| lncRNA type | inter_gene |
| GC content | 0.42 |
| exon number | 1 |
| gene id | G1303 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047595.1 |
| NCBI id | CM018541.1 |
| chromosome length | 35600603 |
| location | 2377828 ~ 2378028 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU1533 | lncRNA | downstream | 113254 | 2264375 ~ 2264574 (-) | True | G1238 |
| TU1531 | lncRNA | downstream | 125436 | 2250950 ~ 2252392 (-) | True | G1236 |
| TU1532 | lncRNA | downstream | 127420 | 2249765 ~ 2250408 (-) | True | G1237 |
| TU1506 | lncRNA | downstream | 212447 | 2163324 ~ 2165381 (-) | True | G1216 |
| XR_003402788.2 | lncRNA | downstream | 248401 | 2112356 ~ 2129427 (-) | True | LOC113526561 |
| TU1605 | lncRNA | upstream | 10675 | 2388703 ~ 2400232 (-) | False | cenpw |
| TU1745 | lncRNA | upstream | 170750 | 2548778 ~ 2553558 (-) | True | G1422 |
| TU1749 | lncRNA | upstream | 212457 | 2590485 ~ 2639703 (-) | False | G1425 |
| TU1744 | lncRNA | upstream | 235229 | 2613257 ~ 2656299 (-) | True | G1421 |
| TU1748 | lncRNA | upstream | 246055 | 2624083 ~ 2630239 (-) | True | G1425 |
| XM_026914403.2 | mRNA | downstream | 51289 | 2313109 ~ 2326539 (-) | True | rspo3 |
| XM_026913416.2 | mRNA | downstream | 78762 | 2294849 ~ 2299066 (-) | True | cnih4 |
| XM_026914229.2 | mRNA | downstream | 115497 | 2253256 ~ 2262331 (-) | False | preb |
| XM_026914228.2 | mRNA | downstream | 115579 | 2253256 ~ 2262249 (-) | True | preb |
| XM_026914304.2 | mRNA | downstream | 222650 | 2151756 ~ 2155178 (-) | True | LOC113526881 |
| XM_026914141.2 | mRNA | upstream | 10620 | 2388648 ~ 2400257 (-) | True | cenpw |
| XM_026913455.2 | mRNA | upstream | 46723 | 2424751 ~ 2438715 (-) | True | trmt11 |
| XM_026913451.2 | mRNA | upstream | 67701 | 2445729 ~ 2451519 (-) | True | hint3 |
| XM_026913989.2 | mRNA | upstream | 356483 | 2734511 ~ 2775211 (-) | True | osbpl10b |
| XM_034310776.1 | mRNA | upstream | 356483 | 2734511 ~ 2775210 (-) | False | osbpl10b |
| XR_004578099.1 | other | downstream | 1700028 | 677401 ~ 677800 (-) | True | LOC117597201 |
| TU694 | other | downstream | 1778662 | 598781 ~ 599166 (-) | True | G502 |
| TU238 | other | downstream | 2211759 | 158802 ~ 166069 (-) | True | ptpn6 |
| TU237 | other | downstream | 2215762 | 158802 ~ 162066 (-) | False | ptpn6 |
| TU214 | other | downstream | 2238984 | 137374 ~ 138844 (-) | False | spag1b |
| XR_004578455.1 | other | upstream | 62818 | 2440846 ~ 2451520 (-) | False | hint3 |
| TU1883 | other | upstream | 540300 | 2918328 ~ 2919811 (-) | False | eny2 |
| TU2085 | other | upstream | 865807 | 3243835 ~ 3281162 (-) | True | G1718 |
| TU2447 | other | upstream | 1280152 | 3658180 ~ 3659319 (-) | True | G2011 |
| TU2456 | other | upstream | 1296218 | 3674246 ~ 3675836 (-) | True | G2020 |
