Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU1532 |
| length | 644 |
| lncRNA type | inter_gene |
| GC content | 0.38 |
| exon number | 1 |
| gene id | G1237 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047595.1 |
| NCBI id | CM018541.1 |
| chromosome length | 35600603 |
| location | 2249765 ~ 2250408 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU1506 | lncRNA | downstream | 84384 | 2163324 ~ 2165381 (-) | True | G1216 |
| XR_003402788.2 | lncRNA | downstream | 120338 | 2112356 ~ 2129427 (-) | True | LOC113526561 |
| TU1368 | lncRNA | downstream | 377065 | 1869646 ~ 1872700 (-) | True | G1100 |
| TU1357 | lncRNA | downstream | 400038 | 1849526 ~ 1849727 (-) | True | G1089 |
| TU1285 | lncRNA | downstream | 599277 | 1649521 ~ 1650488 (-) | True | G1029 |
| TU1531 | lncRNA | upstream | 542 | 2250950 ~ 2252392 (-) | True | G1236 |
| TU1533 | lncRNA | upstream | 13967 | 2264375 ~ 2264574 (-) | True | G1238 |
| TU1609 | lncRNA | upstream | 127420 | 2377828 ~ 2378028 (-) | True | G1303 |
| TU1605 | lncRNA | upstream | 138295 | 2388703 ~ 2400232 (-) | False | cenpw |
| TU1745 | lncRNA | upstream | 298370 | 2548778 ~ 2553558 (-) | True | G1422 |
| XM_026914304.2 | mRNA | downstream | 94587 | 2151756 ~ 2155178 (-) | True | LOC113526881 |
| XM_026913723.2 | mRNA | downstream | 101785 | 2136806 ~ 2147980 (-) | True | rragca |
| XM_026914110.2 | mRNA | downstream | 321762 | 1924550 ~ 1928003 (-) | True | pou3f1 |
| XM_026914145.2 | mRNA | downstream | 369191 | 1850900 ~ 1880574 (-) | True | fhl3a |
| XM_026913668.2 | mRNA | downstream | 492009 | 1740743 ~ 1757756 (-) | True | gnl2 |
| XM_026914229.2 | mRNA | upstream | 2848 | 2253256 ~ 2262331 (-) | False | preb |
| XM_026914228.2 | mRNA | upstream | 2848 | 2253256 ~ 2262249 (-) | True | preb |
| XM_026913416.2 | mRNA | upstream | 44441 | 2294849 ~ 2299066 (-) | True | cnih4 |
| XM_026914403.2 | mRNA | upstream | 62701 | 2313109 ~ 2326539 (-) | True | rspo3 |
| XM_026914141.2 | mRNA | upstream | 138240 | 2388648 ~ 2400257 (-) | True | cenpw |
| XR_004578099.1 | other | downstream | 1571965 | 677401 ~ 677800 (-) | True | LOC117597201 |
| TU694 | other | downstream | 1650599 | 598781 ~ 599166 (-) | True | G502 |
| TU238 | other | downstream | 2083696 | 158802 ~ 166069 (-) | True | ptpn6 |
| TU237 | other | downstream | 2087699 | 158802 ~ 162066 (-) | False | ptpn6 |
| TU214 | other | downstream | 2110921 | 137374 ~ 138844 (-) | False | spag1b |
| XR_004578455.1 | other | upstream | 190438 | 2440846 ~ 2451520 (-) | False | hint3 |
| TU1883 | other | upstream | 667920 | 2918328 ~ 2919811 (-) | False | eny2 |
| TU2085 | other | upstream | 993427 | 3243835 ~ 3281162 (-) | True | G1718 |
| TU2447 | other | upstream | 1407772 | 3658180 ~ 3659319 (-) | True | G2011 |
| TU2456 | other | upstream | 1423838 | 3674246 ~ 3675836 (-) | True | G2020 |
