Gene
RNA
| Item | Value |
|---|---|
| RNA id | XR_004578231.1 |
| length | 839 |
| lncRNA type | inter_gene |
| GC content | 0.41 |
| exon number | 2 |
| gene id | LOC117597384 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_047599.1 |
| NCBI id | CM018545.1 |
| chromosome length | 32114633 |
| location | 17740637 ~ 17744025 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU100224 | lncRNA | downstream | 12640 | 17726653 ~ 17727997 (-) | True | G84394 |
| TU100221 | lncRNA | downstream | 43551 | 17695290 ~ 17697086 (-) | False | evx2 |
| TU100003 | lncRNA | downstream | 309206 | 17407218 ~ 17431431 (-) | True | LOC117597450 |
| TU100258 | lncRNA | upstream | 89355 | 17833375 ~ 17833589 (-) | True | G84411 |
| TU100815 | lncRNA | upstream | 387390 | 18131410 ~ 18131998 (-) | True | G84881 |
| TU100814 | lncRNA | upstream | 389382 | 18133402 ~ 18133689 (-) | True | G84880 |
| TU100816 | lncRNA | upstream | 390816 | 18134836 ~ 18135614 (-) | True | G84882 |
| TU100817 | lncRNA | upstream | 391649 | 18135669 ~ 18137083 (-) | True | G84883 |
| XM_026912926.2 | mRNA | downstream | 40657 | 17696264 ~ 17699980 (-) | True | evx2 |
| XM_034304792.1 | mRNA | downstream | 61476 | 17667568 ~ 17679161 (-) | False | lnpa |
| XM_026912982.2 | mRNA | downstream | 61476 | 17667569 ~ 17679161 (-) | False | lnpa |
| XM_034304790.1 | mRNA | downstream | 61515 | 17667567 ~ 17679122 (-) | False | lnpa |
| XM_026912536.2 | mRNA | upstream | 137751 | 17881771 ~ 17892018 (-) | True | nfe2l2a |
| XM_034304176.1 | mRNA | upstream | 138181 | 17882201 ~ 17896933 (-) | False | nfe2l2a |
| XM_034304177.1 | mRNA | upstream | 138181 | 17882201 ~ 17887072 (-) | False | nfe2l2a |
| XM_026911925.2 | mRNA | upstream | 193033 | 17937053 ~ 17991511 (-) | False | pde11a |
| XM_026911916.2 | mRNA | upstream | 193033 | 17937053 ~ 17991509 (-) | True | pde11a |
| TU99754 | other | downstream | 700794 | 17028307 ~ 17039843 (-) | False | mettl8 |
| TU99188 | other | downstream | 1519771 | 16219964 ~ 16220866 (-) | True | G83554 |
| TU98290 | other | downstream | 2663442 | 15063425 ~ 15077195 (-) | False | dcaf6 |
| TU98227 | other | downstream | 2903244 | 14827786 ~ 14837393 (-) | False | ndp |
| TU98093 | other | downstream | 3187178 | 14552451 ~ 14553459 (-) | False | med14 |
| TU101475 | other | upstream | 1737100 | 19481120 ~ 19487739 (-) | True | grb14 |
| TU101560 | other | upstream | 1824731 | 19568751 ~ 19573463 (-) | False | steap3 |
| TU101958 | other | upstream | 2482708 | 20226728 ~ 20237615 (-) | True | G85848 |
| XR_004578271.1 | other | upstream | 3392026 | 21136046 ~ 21144621 (-) | False | phgdh |
| XR_004578270.1 | other | upstream | 3392026 | 21136046 ~ 21144621 (-) | True | phgdh |
