Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU101855 |
| length | 210 |
| lncRNA type | inter_gene |
| GC content | 0.54 |
| exon number | 1 |
| gene id | G85768 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047599.1 |
| NCBI id | CM018545.1 |
| chromosome length | 32114633 |
| location | 19937404 ~ 19937613 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU101854 | lncRNA | downstream | 281 | 19936907 ~ 19937123 (-) | True | G85767 |
| TU101836 | lncRNA | downstream | 33115 | 19903930 ~ 19904289 (-) | True | G85749 |
| TU101516 | lncRNA | downstream | 393554 | 19543611 ~ 19543850 (-) | True | G85493 |
| TU101476 | lncRNA | downstream | 459010 | 19464152 ~ 19478394 (-) | True | G85459 |
| TU101866 | lncRNA | upstream | 11978 | 19949591 ~ 19950708 (-) | True | G85774 |
| TU101874 | lncRNA | upstream | 37792 | 19975405 ~ 19976607 (-) | True | G85782 |
| TU101876 | lncRNA | upstream | 45140 | 19982753 ~ 19983112 (-) | True | G85784 |
| TU101873 | lncRNA | upstream | 54914 | 19992527 ~ 19992756 (-) | True | G85781 |
| TU101877 | lncRNA | upstream | 61538 | 19999151 ~ 20000432 (-) | True | G85785 |
| XM_026912620.2 | mRNA | downstream | 19321 | 19904974 ~ 19918083 (-) | True | actr3 |
| XM_026912665.2 | mRNA | downstream | 60409 | 19786091 ~ 19876995 (-) | False | LOC113525964 |
| XM_026912666.2 | mRNA | downstream | 93043 | 19786091 ~ 19844361 (-) | True | LOC113525964 |
| XM_034304558.1 | mRNA | downstream | 234756 | 19692961 ~ 19702648 (-) | True | ddx18 |
| XM_026912320.2 | mRNA | downstream | 256717 | 19675915 ~ 19680687 (-) | True | insig2 |
| XM_034304628.1 | mRNA | upstream | 111178 | 20048791 ~ 20077583 (-) | True | LOC113525902 |
| XM_026912558.2 | mRNA | upstream | 142645 | 20080258 ~ 20083368 (-) | True | fzd7a |
| XM_026912910.2 | mRNA | upstream | 301486 | 20239099 ~ 20266541 (-) | True | raph1a |
| XM_026913085.2 | mRNA | upstream | 407310 | 20344923 ~ 20359284 (-) | True | fer1l6 |
| XM_026913086.2 | mRNA | upstream | 407831 | 20345444 ~ 20359285 (-) | False | fer1l6 |
| TU101560 | other | downstream | 363941 | 19568751 ~ 19573463 (-) | False | steap3 |
| TU101475 | other | downstream | 449665 | 19481120 ~ 19487739 (-) | True | grb14 |
| TU99754 | other | downstream | 2897561 | 17028307 ~ 17039843 (-) | False | mettl8 |
| TU99188 | other | downstream | 3716538 | 16219964 ~ 16220866 (-) | True | G83554 |
| TU98290 | other | downstream | 4860209 | 15063425 ~ 15077195 (-) | False | dcaf6 |
| TU101958 | other | upstream | 289115 | 20226728 ~ 20237615 (-) | True | G85848 |
| XR_004578271.1 | other | upstream | 1198433 | 21136046 ~ 21144621 (-) | False | phgdh |
| XR_004578270.1 | other | upstream | 1198433 | 21136046 ~ 21144621 (-) | True | phgdh |
| TU102877 | other | upstream | 1362274 | 21299887 ~ 21305100 (-) | False | dhrs9 |
| TU102903 | other | upstream | 1520122 | 21457735 ~ 21459330 (-) | False | LOC117597354 |
